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Favourite species

  • Mouse (129S1_SvImJ_R)
  • Mouse (A_J_R)
  • Mouse (AKR_J_R)
  • Mouse (BALB_cJ_R)
  • Mouse (C3H_HeJ_R)
  • Mouse (C57BL_6NJ_R)
  • Mouse (CAST_EiJ_R)
  • Mouse (CBA_J_R)
  • Mouse (DBA_2J_R)
  • Mouse (FVB_NJ_R)
  • Mouse (LP_J_R)
  • Mouse (NOD_ShiLtJ_R)
  • Mouse (NZO_HlLtJ_R)
  • Mouse (PWK_PhJ_R)
  • Mouse (SPRET_EiJ_R)
  • Mouse (WSB_EiJ_R)
  • Mouse (CAROLI_EiJ)
  • Mouse (Pahari_EiJ)
  • ()
  • mAcoCah1 (10x.a2)
  • mAcoRus1 (PB.a3.s1.g1.p2)
  • mAcoKem2 (10X.a1.ps1.c)
  • mAcoPer2 (10X.a2.ps1.pu)
  • mPsaObe1 (10x.a2.c.pu2)
  • mLopImh1 (10X.a1.ps1.c)

All species

  • Mouse (129S1_SvImJ_R)
  • Mouse (DBA_2J_R)
  • Mouse (WSB_EiJ_R)
  • Mouse (AKR_J_R)
  • Mouse (FVB_NJ_R)
  • Mouse (eve)
  • Mouse (A_J_R)
  • Mouse (GRCm38.p3)
  • mAcoCah1 (10x.a2)
  • Mouse (BALB_cJ_R)
  • Mouse (LP_J_R)
  • mAcoKem2 (10X.a1.ps1.c)
  • Mouse (C3H_HeJ_R)
  • Mouse (NOD_ShiLtJ_R)
  • mAcoPer2 (10X.a2.ps1.pu)
  • Mouse (C57BL_6NJ_R)
  • Mouse (NZO_HlLtJ_R)
  • mAcoRus1 (PB.a3.s1.g1.p2)
  • Mouse (CAROLI_EiJ)
  • Mouse (PWK_PhJ_R)
  • mLopImh1 (10X.a1.ps1.c)
  • Mouse (CAST_EiJ_R)
  • Mouse (Pahari_EiJ)
  • mPsaObe1 (10x.a2.c.pu2)
  • Mouse (CBA_J_R)
  • Mouse (SPRET_EiJ_R)
  •  

Recent locations

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Punchlist(s)
  • Overview
  • Incomplete Transcripts
  • Incomplete Transcripts CCDS
  • Incomplete Transcripts lncRNA
  • JIRA ticket(s)
  • Clone-contig wrong chr
  • Clone-contig misordering
  • Clone-contig misorientation
  • Transcript Organization (ccds)
  • Transcript Organization (lncRNA)
  • Transcript Organization (refseq)
  • Transcript Orphans
  • Transcript Orphans CCDS
  • Transcript Orphans lncRNA

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Please contact us for additional Punchlists.

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Overview

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Punchlist for: Transcript Orphans lncRNA

Transcript NameUnlocalized/Unplaced LocationComponentContains hits in other locations with weaker coverageExtra Annotation
1010001B22Rik(ENSMUST00000181488.1) Un(Un)
1700047M11Rik(ENSMUST00000185216.2) Un(Un)
4930433N12Rik(ENSMUST00000048921.12) Un(Un)
4930433N12Rik(ENSMUST00000188577.1) Un(Un)
C4a(ENSMUST00000160309.2) Un(Un)
Fbxw27(ENSMUST00000197125.1) Un(Un) *
G530011O06Rik(ENSMUST00000154810.1) Un(Un)
Gm11008(ENSMUST00000178432.1) Un(Un) *
Gm11131(ENSMUST00000113886.2) Un(Un)
Gm15135(ENSMUST00000149813.1) Un(Un)
Gm15247(ENSMUST00000124513.1) Un(Un)
Gm15726(ENSMUST00000144738.1) Un(Un)
Gm21980(ENSMUST00000180032.1) Un(Un)
Gm26870(ENSMUST00000181242.1) Un(Un)
Gm26870(ENSMUST00000181572.1) Un(Un)
Gm26870(ENSMUST00000181957.1) Un(Un)
Gm28174(ENSMUST00000191003.1) Un(Un)
Gm29405(ENSMUST00000187204.1) Un(Un)
Gm29408(ENSMUST00000187536.1) Un(Un)
Gm29557(ENSMUST00000188245.1) Un(Un)
Gm37042(ENSMUST00000193816.1) Un(Un)
Gm42756(ENSMUST00000196601.1) Un(Un)
Gm8953(ENSMUST00000198497.1) Un(Un)

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Punchlist(s)

  • Overview
  • Incomplete Transcripts
  • Incomplete Transcripts CCDS
  • Incomplete Transcripts lncRNA
  • JIRA ticket(s)
  • Clone-contig wrong chr
  • Clone-contig misordering
  • Clone-contig misorientation
  • Transcript Organization (ccds)
  • Transcript Organization (lncRNA)
  • Transcript Organization (refseq)
  • Transcript Orphans
  • Transcript Orphans CCDS
  • Transcript Orphans lncRNA
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gEVAL Browser release 73 - February 2014

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