CBA_J_R20150818PGP-viewer
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Favourite species

  • Mouse (129S1_SvImJ_R)
  • Mouse (A_J_R)
  • Mouse (AKR_J_R)
  • Mouse (BALB_cJ_R)
  • Mouse (C3H_HeJ_R)
  • Mouse (C57BL_6NJ_R)
  • Mouse (CAST_EiJ_R)
  • Mouse (CBA_J_R)
  • Mouse (DBA_2J_R)
  • Mouse (FVB_NJ_R)
  • Mouse (LP_J_R)
  • Mouse (NOD_ShiLtJ_R)
  • Mouse (NZO_HlLtJ_R)
  • Mouse (PWK_PhJ_R)
  • Mouse (SPRET_EiJ_R)
  • Mouse (WSB_EiJ_R)
  • Mouse (CAROLI_EiJ)
  • Mouse (Pahari_EiJ)
  • ()
  • mAcoCah1 (10x.a2)
  • mAcoRus1 (PB.a3.s1.g1.p2)
  • mAcoKem2 (10X.a1.ps1.c)
  • mAcoPer2 (10X.a2.ps1.pu)
  • mPsaObe1 (10x.a2.c.pu2)
  • mLopImh1 (10X.a1.ps1.c)

All species

  • Mouse (129S1_SvImJ_R)
  • Mouse (DBA_2J_R)
  • Mouse (WSB_EiJ_R)
  • Mouse (AKR_J_R)
  • Mouse (FVB_NJ_R)
  • Mouse (eve)
  • Mouse (A_J_R)
  • Mouse (GRCm38.p3)
  • mAcoCah1 (10x.a2)
  • Mouse (BALB_cJ_R)
  • Mouse (LP_J_R)
  • mAcoKem2 (10X.a1.ps1.c)
  • Mouse (C3H_HeJ_R)
  • Mouse (NOD_ShiLtJ_R)
  • mAcoPer2 (10X.a2.ps1.pu)
  • Mouse (C57BL_6NJ_R)
  • Mouse (NZO_HlLtJ_R)
  • mAcoRus1 (PB.a3.s1.g1.p2)
  • Mouse (CAROLI_EiJ)
  • Mouse (PWK_PhJ_R)
  • mLopImh1 (10X.a1.ps1.c)
  • Mouse (CAST_EiJ_R)
  • Mouse (Pahari_EiJ)
  • mPsaObe1 (10x.a2.c.pu2)
  • Mouse (CBA_J_R)
  • Mouse (SPRET_EiJ_R)
  •  

Recent locations

  • Clear history
Punchlist(s)
  • Overview
  • Incomplete Transcripts
  • Incomplete Transcripts CCDS
  • Incomplete Transcripts lncRNA
  • Bionano indels (CBA_J-R20150818)
  • JIRA ticket(s)
  • Clone-contig wrong chr
  • Clone-contig misordering
  • Clone-contig misorientation
  • Transcript Organization (ccds)
  • Transcript Organization (lncRNA)
  • Transcript Organization (refseq)
  • Transcript Orphans
  • Transcript Orphans CCDS
  • Transcript Orphans lncRNA

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Please contact us for additional Punchlists.

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Overview

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Punchlist for: Transcript Orphans CCDS

Transcript NameUnlocalized/Unplaced LocationComponentContains hits in other locations with weaker coverageExtra Annotation
2610044O15Rik8(CCDS80947.1) Un(Un) *
A430089I19Rik(CCDS51557.1) Un(Un) *
Ang2(CCDS27040.1) Un(Un)
Apol11a(CCDS49661.1) Un(Un)
Apol11b(CCDS49662.1) Un(Un)
Aurkc(CCDS39754.1) Un(Un)
B020031M17Rik(CCDS56906.1) Un(Un)
BC061212(CCDS39162.1) Un(Un) *
Ccl21a(CCDS18081.1) Un(Un)
Ccl21b(CCDS51145.1) Un(Un)
Cml3(CCDS20299.1) Un(Un)
Defa26(CCDS40278.1) Un(Un)
Esp18(CCDS57088.1) Un(Un)
Esp34(CCDS57084.1) Un(Un)
Etohi1(CCDS50835.1) Un(Un) *
Gm10591(CCDS51158.1) Un(Un)
Gm11128(CCDS51830.1) Un(Un)
Gm13154(CCDS18921.1) Un(Un)
Gm13304(CCDS51148.1) Un(Un)
Gm14288(CCDS50822.1) Un(Un) *
Gm14295(CCDS57201.1) Un(Un) *
Gm14296(CCDS79875.1) Un(Un)
Gm15292(CCDS52507.1) Un(Un)
Gm20767(CCDS56908.1) Un(Un)
Gm21188(CCDS79248.1) Un(Un)
Gm21541(CCDS57267.1) Un(Un)
Gm4477(CCDS57434.1) Un(Un)
Gm5800(CCDS27042.1) Un(Un)
Gm7978(CCDS57365.1) Un(Un) *
Gm9994(CCDS56641.1) Un(Un)
Ifi203(CCDS35793.1) Un(Un)
Ifi203(CCDS48453.1) Un(Un)
Ifi203(CCDS78754.1) Un(Un)
Itln1(CCDS35777.1) Un(Un) *
Klk1b1(CCDS21190.1) Un(Un)
Klk1b9(CCDS21191.1) Un(Un)
LOC106029237(CCDS79246.1) Un(Un)
Olfr1085(CCDS16263.1) Un(Un)
Olfr611(CCDS40055.1) Un(Un)
Olfr612(CCDS52337.1) Un(Un)
Saa1(CCDS21284.1) Un(Un)
Saa2(CCDS21285.1) Un(Un)
Serpinb3b(CCDS15216.1) Un(Un) *
Sprr2a1(CCDS17548.1) Un(Un)
Sprr2a2(CCDS50975.1) Un(Un)
Zfp825(CCDS79212.1) Un(Un) *

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Punchlist(s)

  • Overview
  • Incomplete Transcripts
  • Incomplete Transcripts CCDS
  • Incomplete Transcripts lncRNA
  • Bionano indels (CBA_J-R20150818)
  • JIRA ticket(s)
  • Clone-contig wrong chr
  • Clone-contig misordering
  • Clone-contig misorientation
  • Transcript Organization (ccds)
  • Transcript Organization (lncRNA)
  • Transcript Organization (refseq)
  • Transcript Orphans
  • Transcript Orphans CCDS
  • Transcript Orphans lncRNA
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gEVAL Browser release 73 - February 2014

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