Please contact us for additional Punchlists.

Overview

Punchlist for: Bionano indels (CBA_J-R20150818)

Chromosome: X

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
X:5913178-5946255	98	deletion	9830	8.92	+
X:6078469-6106899	98	deletion	6305	9.16	+
X:6193695-6233636	98	insertion	8314	8.24	+
X:6360889-6489459	98	deletion	14755	6.88	+
X:6548397-6589325	98	deletion	6320	5.49	+
X:7112847-7124963	1403	deletion	2891	4.08	+
X:7139407-7150942	1403	deletion	3954	4.66	+
X:16726583-16836033	245	deletion	14529	4.05	+
X:17028999-17101882	245	deletion	18287	5.69	+
X:33130371-33144710	821	insertion	7014	4.43	-
X:46054935-46061376	1364	insertion	2603	4.41	-
X:49598472-49713082	116	deletion	20489	5.81	+
X:49748948-49814161	116	deletion	9758	4.37	+
X:50211095-50250488	116	deletion	3694	4.28	+
X:50309258-50314690	116	deletion	1907	7.19	+
X:50819423-50845761	1384	deletion	4505	5.99	+
X:50914760-51034524	1384	deletion	20073	5.75	+
X:86018913-86041924	1500	deletion	5393	4.93	+
X:86075373-86166799	1500	deletion	20658	5.09	+
X:86197828-86420175	1500	deletion	17036	5.83	+
X:138681948-138721446	625	deletion	6576	6.19	+
X:138813453-138934400	625	deletion	6617	6.81	+
X:139029133-139032206	625	deletion	2056	5.32	+
X:145892733-145904749	1063	deletion	2101	4.12	+
X:149430591-149454889	262	deletion	4765	4.71	+
X:149589490-149605746	262	deletion	3032	8.32	+
X:149669109-149703883	262	insertion	931	4.36	+
X:149750304-149876502	262	deletion	4097	8.97	+
X:150027323-150131334	262	insertion	17237	4.09	+
X:150309083-150384509	262	deletion	15892	4.74	+
X:156916600-157000476	1456	deletion	23094	5.95	-
X:157086479-157091600	1456	insertion	4007	4.33	-
X:167130203-167313752	1140	deletion	160228	15.14	+
X:167327071-167335322	1140	insertion	136507	11.72	+
X:167394392-167512600	1140	deletion	19296	11.05	+
X:167582591-167666616	1140	deletion	15762	9.75	+
X:167687925-167696622	1140	deletion	5697	9.42	+
X:167905233-167936939	1140	deletion	4570	12.51	+
X:167964230-167992713	1140	deletion	10775	14.76	+
X:168061841-168072430	1140	deletion	5428	13.71	+

Chromosome: 1

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
1:9062117-9075308	2253	deletion	9020	5.30	+
1:9234528-9235756	2253	insertion	5699	5.85	+
1:9252682-9256120	2253	insertion	2076	5.23	+
1:34707041-34781234	2499	deletion	6835	4.22	-
1:36043407-36080578	344	deletion	18292	4.66	-
1:37131480-37165179	541	deletion	11810	5.96	+
1:37229973-37247950	541	deletion	9903	8.47	+
1:37292970-37378126	541	deletion	31911	8.34	+
1:37511042-37523124	541	deletion	4462	4.64	+
1:39374953-39391054	6463	deletion	7412	4.86	-
1:39789016-39827082	1388	deletion	4636	5.66	+
1:39909487-39977657	1388	deletion	8743	5.17	+
1:40634053-40641285	672	deletion	2359	5.86	-
1:44512635-44526704	922	deletion	7441	4.59	+
1:44598017-44681654	922	deletion	17160	4.54	+
1:44716697-44728768	922	deletion	1964	4.72	+
1:44757542-44802360	922	deletion	22017	5.96	+
1:44949727-44962303	3952	insertion	3885	5.21	-
1:54894608-54902092	690	deletion	2105	6.26	-
1:74889265-74916508	1798	deletion	11720	6.20	+
1:77844647-77857424	6918	deletion	5374	7.25	-
1:77890872-77897505	6918	insertion	5300	7.81	-
1:82526542-82648281	464	deletion	3179	4.13	+
1:93187101-93297814	16	deletion	31587	9.41	-
1:93356078-93378840	16	deletion	7918	9.96	-
1:93424439-93465037	16	deletion	9653	8.57	-
1:97429974-97455283	6444	insertion	92056	4.62	-
1:98080465-98085626	57	deletion	3555	6.73	-
1:98123613-98131846	57	deletion	6160	8.86	-
1:98154619-98163973	57	deletion	2445	9.39	-
1:98252110-98322111	57	deletion	13248	14.12	-
1:98354778-98483350	57	deletion	20747	11.38	-
1:98650709-98669827	57	deletion	3911	13.74	-
1:98709840-98765955	57	deletion	10492	20.09	-
1:98795789-98882136	57	deletion	18523	20.09	-
1:98915653-98922998	57	deletion	2169	8.11	-
1:99024229-99038457	57	deletion	2990	7.85	-
1:99092902-99255440	57	deletion	30714	6.39	-
1:99297370-99335111	57	deletion	11803	6.83	-
1:99405519-99532246	57	deletion	22216	6.85	-
1:99594519-99614111	57	deletion	4168	5.06	-
1:100271235-100277814	2783	deletion	2044	7.36	+
1:101150439-101178403	123	deletion	9532	4.95	-
1:101311151-101388593	123	deletion	18875	11.77	-
1:101448188-101453379	123	deletion	3170	12.95	-
1:101487606-101525737	123	deletion	12326	12.29	-
1:101592220-101604919	123	deletion	6524	7.95	-
1:101738309-101812046	123	deletion	11236	5.79	-
1:130769424-130796874	805	deletion	5186	10.96	+
1:130815316-130823517	805	deletion	4018	10.44	+
1:130885533-130936024	805	deletion	5632	7.22	+
1:138403008-138458066	514	deletion	9715	9.91	+
1:138482643-138486992	514	deletion	2185	10.26	+
1:138527776-138545706	514	deletion	8956	10.39	+
1:138645387-138648924	514	insertion	5716	8.34	+
1:148336988-148342158	4226	deletion	2235	8.73	+
1:148367779-148378790	4226	deletion	2219	6.01	+
1:148444245-148463696	4226	deletion	3588	9.45	+
1:149347092-149352498	306	deletion	3234	5.50	-
1:149425982-149454505	306	deletion	9038	13.66	-
1:149517463-149543377	306	deletion	10102	17.74	-
1:149651821-149754821	306	deletion	14807	10.81	-
1:149782909-149792267	306	deletion	2760	11.11	-
1:149846318-149926290	306	deletion	20637	8.38	-
1:149987873-149994898	306	deletion	1854	5.53	-
1:166173441-166192972	250	deletion	4840	6.05	-
1:166231143-166238696	250	deletion	4976	6.10	-
1:166273648-166309393	250	deletion	7678	7.11	-
1:166329405-166452909	250	deletion	20363	4.24	-
1:166559191-166642736	250	deletion	16954	4.99	-
1:166720544-166726029	250	deletion	3270	9.10	-
1:166796140-166830071	250	deletion	13013	9.95	-
1:166863286-167006104	250	deletion	1271	11.27	-
1:167110137-167134809	250	deletion	9279	15.97	-
1:167169314-167273416	250	deletion	20784	15.20	-
1:167331444-167462002	250	deletion	100334	15.72	-
1:167468787-167564355	250	insertion	53681	11.07	-
1:167628762-167663715	250	deletion	6135	11.26	-
1:167714315-167730245	250	deletion	2912	8.91	-
1:167764442-167818206	250	deletion	9680	13.70	-
1:167899933-167907573	250	deletion	3476	15.19	-
1:167957373-167973873	250	deletion	8308	14.59	-
1:167997518-168051533	250	deletion	12586	14.96	-
1:168081510-168085687	250	insertion	1430	4.10	-
1:168141138-168238448	250	deletion	12129	11.78	-
1:168279713-168312927	250	deletion	9809	12.92	-
1:170983504-171010095	49	deletion	4477	4.46	-
1:171091897-171139822	49	deletion	7382	9.97	-
1:171253798-171263928	49	deletion	5594	17.03	-
1:171305493-171316407	49	deletion	2178	6.10	-
1:171362936-171434639	49	deletion	9878	14.22	-
1:171560173-171579262	49	deletion	4548	13.73	-
1:171633365-171674968	49	deletion	7069	8.89	-
1:171697363-171836512	49	deletion	13685	11.48	-
1:171892025-171930334	49	deletion	4915	7.73	-
1:171976425-172011784	49	deletion	11015	5.68	-
1:172066253-172084593	49	deletion	6199	4.85	-
1:183516669-183527088	1114	deletion	3025	6.91	-
1:183567679-183609551	1114	deletion	8421	6.53	-
1:183648207-183673996	1114	deletion	695	4.73	-
1:183704202-183867655	1114	deletion	20256	5.87	-
1:186105784-186113482	573	deletion	5179	7.06	+
1:186145737-186151548	573	deletion	2191	7.39	+
1:193424847-193498713	2647	deletion	16655	6.86	+
1:193539493-193570209	2647	deletion	15299	7.06	+
1:193603609-193622553	2647	deletion	5939	6.37	+
1:193649355-193787942	2647	deletion	38709	6.11	+
1:194037615-194166725	2647	deletion	19286	4.64	+
1:194540662-194570010	2647	deletion	12743	17.02	+
1:196144316-196163416	4370	deletion	3689	4.41	-
1:196232789-196315306	4370	deletion	18645	4.47	-
1:196537387-196584189	4370	deletion	15657	7.53	-
1:196768805-196776940	4370	deletion	1989	4.43	-
1:198367656-198374507	697	deletion	1934	4.48	+
1:198452618-198565845	697	deletion	13142	4.81	+
1:199519054-199535478	6801	deletion	3853	4.88	-
1:199578400-199596426	6801	deletion	4617	4.20	-
1:200189694-200208746	885	deletion	5589	4.02	-
1:204432859-204450275	1248	insertion	7421	5.16	-
1:204998825-205003851	3327	deletion	3105	7.35	-
1:205060815-205081367	3327	deletion	12470	6.20	-
1:207560168-207726211	5626	deletion	30153	6.35	+
1:207799642-207877475	5626	deletion	14229	7.11	+
1:208533958-208572698	5626	deletion	13030	6.04	+
1:209173989-209339592	3955	deletion	18369	4.15	-
1:209407251-209421327	3955	deletion	6018	8.91	-
1:209523969-209543151	3955	deletion	9101	10.85	-
1:209609467-209624117	3955	deletion	3182	9.34	-
1:209682391-209799704	3955	deletion	15883	5.95	-
1:209813709-209956141	3955	insertion	49371	8.00	-
1:209973294-210078315	3955	deletion	102094	11.80	-
1:210117442-210140725	3955	deletion	3299	7.87	-
1:210178565-210322316	3955	deletion	9164	9.97	-
1:210363712-210388438	3955	deletion	6130	11.99	-
1:210408544-210419464	3955	deletion	2382	7.76	-
1:210454611-210530580	3955	deletion	25565	11.40	-
1:210925824-210933894	2107	deletion	1802	4.41	+
1:211125648-211135477	2107	insertion	3785	4.98	+
1:213712397-213751503	2607	deletion	7433	5.25	+
1:213767307-213790532	2607	deletion	5905	6.27	+
1:213847458-213858231	2607	deletion	2260	5.73	+
1:214204952-214243422	193	deletion	5460	6.60	-
1:214321410-214334414	193	deletion	4114	16.55	-
1:214362869-214413999	193	deletion	12226	15.66	-
1:214473015-214477763	193	deletion	2529	15.57	-
1:214565339-214684088	193	deletion	21941	11.07	-
1:214745564-214753114	193	deletion	5103	10.82	-
1:214853108-214858224	193	deletion	3029	5.64	-
1:214887820-214906496	193	deletion	9357	5.33	-
1:214925369-214950881	193	insertion	3274	6.33	-

Chromosome: 2

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
2:3807414-3825244	2874	deletion	9112	4.82	+
2:4111750-4178518	2874	deletion	21784	4.98	+
2:8526603-8597774	2399	insertion	5577	4.06	+
2:11403605-11428735	5983	deletion	4994	5.84	-
2:11495133-11660489	5983	deletion	18652	4.23	-
2:23727855-23754413	225	deletion	4011	8.19	-
2:23785314-23796713	225	deletion	2430	6.96	-
2:23823985-23837307	225	deletion	10180	8.23	-
2:23879194-23924645	225	deletion	6045	7.22	-
2:24065225-24082696	225	deletion	5216	7.59	-
2:24128170-24255037	225	deletion	32722	9.31	-
2:24312478-24389463	225	deletion	70288	5.94	-
2:24406188-24481796	225	insertion	27745	8.84	-
2:24569855-24597188	225	deletion	13509	7.59	-
2:27723588-27740354	186	deletion	9084	10.86	+
2:27789237-27807115	186	deletion	5005	10.99	+
2:28700367-28730908	1375	deletion	19409	7.12	+
2:28867901-28922745	1375	deletion	9518	12.32	+
2:28967400-28968019	1375	insertion	72181	11.42	+
2:28992059-29103934	1375	deletion	57547	12.76	+
2:29115828-29237257	1375	deletion	72248	14.56	+
2:29276154-29397910	1375	deletion	13965	14.33	+
2:29427381-29442291	1375	deletion	7998	16.40	+
2:29463991-29474848	1375	deletion	2031	4.66	+
2:29558109-29634630	1375	deletion	19244	6.14	+
2:29672414-29679188	1375	deletion	1631	4.12	+
2:31684189-31701750	5630	deletion	3172	5.91	+
2:33496388-33546199	1178	deletion	19838	7.60	+
2:33640897-33662509	1178	deletion	10273	7.09	+
2:33720929-33726332	1178	deletion	2595	6.61	+
2:34543859-34562085	134	deletion	5551	6.37	-
2:34650111-34679925	134	deletion	8862	8.90	-
2:34727208-34774217	134	deletion	15624	7.86	-
2:34848299-34931336	134	insertion	4186	5.89	-
2:34962830-35002053	134	deletion	23800	8.31	-
2:35024863-35048126	134	deletion	8486	7.74	-
2:35068181-35208745	134	deletion	28672	8.67	-
2:35252259-35326426	134	deletion	10544	10.94	-
2:35444632-35513664	134	deletion	9670	9.76	-
2:35579212-35672034	134	deletion	13139	9.51	-
2:35706518-35771312	134	deletion	12513	10.63	-
2:35908314-35920855	134	deletion	3677	4.12	-
2:36051899-36188735	4748	deletion	22139	4.56	-
2:36923687-36958629	4843	deletion	11562	5.15	-
2:37038858-37052216	4843	deletion	8071	6.15	-
2:37098221-37113363	4843	deletion	5294	5.82	-
2:37132238-37153847	4843	deletion	4483	5.79	-
2:39073709-39124966	998	deletion	4666	5.34	-
2:39300920-39454836	998	deletion	46921	4.11	-
2:39608853-39675535	998	deletion	11673	4.56	-
2:46679111-46761595	1524	deletion	13001	7.66	+
2:51958309-52129233	524	deletion	18485	4.19	+
2:52168843-52175691	524	deletion	2174	5.21	+
2:63449958-63459015	1001	deletion	2806	5.25	-
2:63498433-63530074	1001	deletion	7398	4.95	-
2:63574658-63590954	1001	deletion	2893	5.12	-
2:63622729-63632830	1001	deletion	6062	5.31	-
2:63652973-63674086	1001	deletion	7281	5.79	-
2:63832143-63890763	1001	deletion	16725	5.14	-
2:64082387-64116812	1001	deletion	7030	5.49	-
2:64143130-64149040	1001	deletion	1901	6.38	-
2:64189194-64352130	1001	deletion	19743	4.91	-
2:69212429-69248072	1448	deletion	5551	6.26	+
2:69269385-69285114	1448	deletion	2974	4.92	+
2:70180721-70329804	7089	deletion	21883	4.28	-
2:72086011-72103844	4818	insertion	13440	4.34	+
2:77363648-77374236	1165	deletion	8741	5.16	-
2:80032734-80038021	920	deletion	3409	4.37	+
2:80075793-80232585	920	deletion	35908	4.64	+
2:80283458-80324513	920	deletion	5073	6.46	+
2:80538778-80575763	920	deletion	7901	5.33	+
2:80622455-80648757	920	deletion	7066	5.05	+
2:82400561-82450487	7078	deletion	7131	5.39	-
2:82467164-82475194	7078	deletion	2456	6.30	-
2:82494099-82502855	7078	deletion	2966	7.21	-
2:83449833-83471715	650	deletion	10431	4.92	-
2:84060946-84169441	3061	insertion	729	6.87	-
2:84238028-84293214	3061	deletion	15236	5.92	-
2:85749586-85759173	402	insertion	3367	5.49	-
2:100309404-100374991	6476	deletion	9678	7.48	+
2:101123205-101144022	4673	deletion	3665	7.12	-
2:101202658-101240148	4673	deletion	6380	5.03	-
2:110952808-110971619	7051	deletion	4649	4.65	-
2:111399840-111409871	17	deletion	2125	5.65	+
2:111430936-111485896	17	deletion	15270	5.77	+
2:111514197-111618007	17	deletion	16919	4.18	+
2:111753863-111763856	17	insertion	4335	8.04	+
2:111833825-111853465	17	deletion	4808	12.87	+
2:111927671-112030601	17	deletion	96407	15.73	+
2:112095609-112204952	17	insertion	48188	13.86	+
2:112265176-112305394	17	deletion	7247	14.02	+
2:112341471-112354727	17	deletion	2772	8.25	+
2:112393722-112428191	17	deletion	9728	13.96	+
2:112449978-112474991	17	deletion	3732	8.54	+
2:112506501-112662256	17	deletion	82896	12.55	+
2:112669078-112784170	17	insertion	51985	8.10	+
2:113083874-113182000	17	deletion	18473	8.71	+
2:113233803-113309231	17	deletion	14316	5.41	+
2:113327441-113411448	17	deletion	34116	8.04	+
2:113462557-113481052	17	deletion	8930	4.89	+
2:130527864-130557161	629	deletion	6769	4.39	-
2:132473534-132499933	1636	deletion	8694	4.19	+
2:136978124-137035168	375	deletion	13854	7.14	+
2:137072926-137154509	375	deletion	24930	8.45	+
2:137219036-137245570	375	deletion	8968	11.59	+
2:137296699-137302914	375	deletion	2927	14.92	+
2:137337571-137356770	375	deletion	4201	13.60	+
2:140368748-140404187	198	deletion	8605	4.57	+
2:140610331-140627712	198	deletion	2820	4.19	+
2:140696640-140741706	198	deletion	7658	4.84	+
2:140782823-140790594	198	deletion	4503	8.76	+
2:140879564-140886054	198	deletion	2017	7.21	+
2:140918257-140928194	198	deletion	6125	13.10	+
2:140945224-140963351	198	deletion	5387	12.66	+
2:141027123-141059478	198	deletion	10427	4.89	+
2:143279866-143287628	91	insertion	27574	4.85	-
2:143328004-143408635	91	deletion	55856	5.71	-
2:143426494-143499950	91	deletion	27858	4.34	-
2:147122222-147272570	4574	deletion	44472	4.06	-
2:147354429-147412099	4574	deletion	4952	5.26	-
2:150518161-150547585	699	deletion	6583	8.77	-
2:150618261-150758750	699	deletion	27458	8.75	-
2:150783238-150929922	699	deletion	16526	6.41	-
2:151090879-151119940	699	deletion	9145	16.12	-
2:151190104-151267636	699	deletion	10863	11.88	-
2:151324777-151355807	699	deletion	10600	11.45	-
2:151380643-151401496	699	deletion	2751	6.82	-
2:151426255-151571118	699	deletion	7860	10.47	-
2:151666400-151727915	699	deletion	3315	8.14	-
2:151788553-151801024	699	deletion	2415	5.93	-
2:151833758-151910576	699	deletion	6251	4.49	-
2:159762680-159775453	145	deletion	3416	4.97	-
2:159897913-160021819	145	deletion	24297	4.69	-
2:160049491-160080530	145	deletion	5776	4.11	-
2:160110548-160119155	145	deletion	2285	5.61	-
2:171223232-171244108	5758	deletion	5339	5.65	+
2:171333085-171355437	5758	deletion	3551	6.00	+
2:171413292-171423421	1702	deletion	7536	4.61	+
2:173185544-173203589	252	deletion	4045	8.14	-
2:173259886-173295973	252	deletion	11653	6.48	-
2:173328919-173447527	252	insertion	3726	5.30	-
2:173485194-173534583	252	deletion	39458	7.45	-
2:173562851-173691418	252	deletion	18755	6.48	-
2:174384034-174409741	582	deletion	8581	5.52	-
2:174894512-174958667	327	deletion	15101	5.33	+
2:175023863-175034402	327	deletion	8304	6.38	+
2:175091953-175218246	327	deletion	20998	7.08	+
2:175304348-175338593	327	deletion	9174	10.99	+
2:175421705-175456540	327	deletion	361	5.14	+
2:175546365-175660890	327	deletion	3424	9.17	+
2:175711663-175805284	327	deletion	12039	8.08	+
2:175833379-175994285	327	deletion	33038	9.47	+
2:176047327-176084343	327	deletion	14831	9.28	+
2:178558135-178573915	1964	deletion	6039	9.48	+
2:178602952-178627689	1964	deletion	6418	8.84	+
2:178682881-178744595	1964	deletion	6861	7.64	+
2:179830268-179836842	1112	deletion	2330	7.18	+
2:179939340-179966929	1112	deletion	9318	10.80	+
2:180011528-180050710	1112	deletion	8131	7.12	+
2:189126974-189212998	364	deletion	14045	4.51	+
2:189252641-189257084	364	deletion	1928	5.32	+
2:189291493-189297610	364	deletion	2028	4.17	+
2:191943471-191988764	1170	deletion	12304	4.85	+
2:197465707-197532861	20	deletion	5565	4.14	-
2:197569588-197608868	20	deletion	6498	4.88	-
2:197634226-197641780	20	deletion	3041	4.84	-
2:197723168-197836850	20	deletion	20706	9.26	-
2:197870677-197946465	20	deletion	13859	6.87	-
2:198036682-198048286	20	deletion	2560	7.75	-
2:198087028-198118215	20	deletion	7701	12.63	-
2:198259003-198267716	20	deletion	2246	7.34	-
2:198357221-198445666	20	deletion	13167	30.06	-
2:198563373-198576437	20	deletion	4322	18.76	-
2:198598622-198623403	20	deletion	5608	19.23	-
2:198649254-198667105	20	deletion	4330	19.56	-
2:198725268-198734142	20	insertion	62550	17.85	-
2:198741280-198847957	20	deletion	96342	20.70	-
2:198876471-198892573	20	deletion	8088	20.29	-
2:198916827-198999984	20	deletion	28263	18.15	-
2:199035038-199045215	20	deletion	3622	18.84	-
2:199092770-199153456	20	deletion	19913	19.40	-
2:199193022-199263909	20	deletion	11076	21.15	-
2:199383119-199395615	20	deletion	8341	14.74	-
2:199424012-199441237	20	deletion	6692	14.37	-
2:199504744-199535819	20	deletion	9627	9.56	-
2:199574819-199608770	20	deletion	12229	8.26	-
2:199661935-199682240	20	deletion	5619	9.55	-
2:199722599-199730700	20	deletion	2948	9.88	-

Chromosome: 3

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
3:20858759-20876744	4168	deletion	9174	4.21	-
3:30614719-30684829	140	deletion	12477	4.17	+
3:37208686-37288374	592	deletion	4182	6.14	-
3:37328317-37531056	592	deletion	21116	4.02	-
3:52743302-52892864	2671	deletion	5950	5.93	-
3:53772691-53839115	4184	deletion	14507	5.95	-
3:53871869-53920339	4184	deletion	12155	5.59	-
3:58325914-58348180	884	deletion	3499	4.99	-
3:58362514-58375962	884	deletion	3791	4.58	-
3:84714453-84761889	1858	deletion	29470	4.10	+
3:87755094-87771022	2082	deletion	2346	4.73	-
3:87884526-87991386	2082	deletion	23819	4.52	-
3:90031199-90038554	6	deletion	3028	6.15	-
3:90104398-90157979	6	deletion	11054	5.17	-
3:90225875-90244544	6	deletion	5606	6.28	-
3:90294225-90306323	6	deletion	2610	8.50	-
3:90334131-90417744	6	deletion	22471	7.10	-
3:90481018-90492457	6	deletion	2853	10.71	-
3:90542771-90646884	6	insertion	33073	11.59	-
3:90673481-90768334	6	deletion	85095	9.38	-
3:90782501-90916782	6	deletion	13515	5.38	-
3:90947447-90998310	6	deletion	17704	4.58	-
3:91092052-91237155	6	deletion	11333	7.29	-
3:91281517-91313867	6	deletion	11007	8.93	-
3:91344497-91368374	6	deletion	4028	10.87	-
3:91422513-91547230	6	deletion	9691	9.25	-
3:91552550-91711606	6	deletion	39641	9.94	-
3:91769212-91782085	6	deletion	8266	11.50	-
3:93593171-93811477	6092	deletion	29506	5.05	-
3:93837843-93890285	6092	deletion	9638	7.29	-
3:93908767-93919195	6092	insertion	5137	7.60	-
3:95323146-95340166	3924	deletion	11500	4.82	+
3:97393499-97401059	492	deletion	3311	19.92	-
3:108557609-108562297	7864	insertion	1351	5.19	+
3:108825990-108836418	702	insertion	7942	5.31	-
3:111469392-111480341	2533	deletion	4154	5.07	+
3:112768994-112782162	393	deletion	2780	9.27	+
3:112865772-112883266	393	deletion	3134	8.35	+
3:112958900-113077395	393	deletion	21132	7.69	+
3:113129716-113144961	393	deletion	3456	7.50	+
3:113528415-113541330	393	deletion	5818	4.62	+
3:114120299-114141059	227	deletion	5622	5.95	+
3:114157437-114325286	227	deletion	50800	7.47	+
3:114348669-114447907	227	insertion	14616	4.35	+
3:114694323-114704679	227	deletion	8265	7.31	+
3:114735762-114796534	227	deletion	14566	5.60	+
3:118044975-118086933	137	deletion	12551	7.77	-
3:118136029-118156972	137	deletion	8568	8.46	-
3:118198715-118226999	137	deletion	11839	6.24	-
3:119415665-119480104	1530	deletion	9147	6.36	+
3:119507818-119520291	1530	deletion	6027	6.78	+
3:119597039-119663756	1530	deletion	13295	5.86	+
3:119751401-119766005	1530	deletion	6083	4.79	+
3:142209493-142251176	135	deletion	9104	4.39	+
3:142293634-142354517	135	deletion	7810	5.23	+
3:142483981-142679385	135	deletion	21942	11.07	+
3:142801891-142814447	135	deletion	6733	6.43	+
3:142847859-142902138	135	deletion	4063	4.48	+
3:147786947-147808111	2170	deletion	8127	4.01	+
3:157207948-157222708	2896	deletion	12532	10.10	+
3:158150442-158157349	78	deletion	2517	11.52	-
3:158179209-158195087	78	deletion	8095	10.90	-
3:158275214-158297195	78	deletion	4111	10.50	-
3:158377484-158794465	78	deletion	177016	11.53	-
3:163132933-163229182	248	deletion	20932	9.98	+
3:163249645-163270995	248	deletion	3753	9.71	+
3:163312321-163369209	248	deletion	16487	9.54	+
3:163424221-163511289	248	deletion	1915	10.89	+
3:163591558-163735772	248	deletion	29782	6.85	+
3:167815100-167819300	3430	deletion	2553	4.40	-
3:172559858-172569537	2099	deletion	3395	8.85	-
3:172616439-172772529	2099	deletion	4548	8.40	-

Chromosome: 4

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
4:23218351-23228865	721	deletion	4732	4.79	-
4:23312848-23452931	721	deletion	22564	4.03	-
4:30931365-31061841	323	deletion	20985	5.09	+
4:31177112-31379753	323	deletion	10090	7.96	+
4:31439128-31505881	323	deletion	3985	8.49	+
4:31564687-31627150	323	deletion	6313	9.60	+
4:31662887-31767199	323	deletion	12895	8.11	+
4:31796933-31834815	323	deletion	5180	7.13	+
4:31896585-31986826	323	deletion	28924	11.70	+
4:32065201-32134379	323	deletion	9385	8.68	+
4:40805229-40825702	1224	deletion	7343	6.00	+
4:42029003-42066134	1342	deletion	7178	4.55	+
4:42243343-42267485	1342	deletion	5693	4.14	+
4:44238072-44245117	5677	deletion	3938	7.66	+
4:44276164-44337168	5677	deletion	16894	7.90	+
4:57202001-57369775	236	deletion	13245	6.86	+
4:57389383-57478596	236	deletion	15752	5.52	+
4:58502805-58585679	2194	deletion	4498	4.22	+
4:58667158-58709677	2194	deletion	12014	6.78	+
4:59619334-59727290	601	deletion	30839	4.89	-
4:59777655-59805428	601	deletion	6719	5.65	-
4:59871687-59879738	601	deletion	2656	8.38	-
4:59926716-59949371	601	deletion	7471	10.76	-
4:60055468-60079925	601	deletion	7047	14.38	-
4:60105439-60185230	601	deletion	17624	13.01	-
4:60205942-60221998	601	deletion	7458	14.95	-
4:60280733-60324842	601	deletion	13155	12.91	-
4:60362906-60373662	601	deletion	5573	14.56	-
4:66544776-66665276	95	deletion	26894	4.04	+
4:66751435-66775274	95	deletion	13647	6.42	+
4:66853450-66883560	95	deletion	10640	7.48	+
4:66967797-67051253	95	deletion	22279	10.75	+
4:67083693-67170493	95	deletion	9093	9.73	+
4:67220886-67301205	95	deletion	13478	7.03	+
4:67357703-67386417	95	deletion	12986	10.55	+
4:81174712-81186250	3020	deletion	4275	4.13	+
4:88908930-88918716	113	insertion	3105	8.41	+
4:88937539-88964202	113	deletion	24562	7.00	+
4:89452968-89467685	113	deletion	4832	12.67	+
4:89483943-89523381	113	insertion	7949	11.59	+
4:89644921-89728036	113	deletion	12304	19.50	+
4:89805527-89927231	113	deletion	22744	22.50	+
4:90048180-90155620	113	deletion	10202	21.25	+
4:90368778-90468779	113	deletion	44553	9.86	+
4:90554483-90595393	113	deletion	6186	7.67	+
4:90630684-90705297	113	deletion	15078	7.41	+
4:91029392-91042156	113	deletion	4171	4.88	+
4:92201701-92308411	411	deletion	18251	5.51	+
4:92428218-92536098	411	deletion	34232	4.39	+
4:92565094-92569296	411	insertion	5871	6.64	+
4:101095341-101117524	224	deletion	4527	7.79	+
4:101169298-101199656	224	deletion	10633	5.75	+
4:101237443-101274531	224	deletion	11029	4.03	+
4:101310128-101443279	224	deletion	28032	6.62	+
4:101464949-101617038	224	deletion	14808	4.17	+
4:101637217-101645036	224	deletion	1697	4.01	+
4:101709214-101725952	224	deletion	7048	5.18	+
4:101756533-101788471	224	deletion	7543	5.24	+
4:101858661-101885036	224	deletion	9449	6.91	+
4:108789185-108811543	229	deletion	7016	4.14	-
4:110426441-110432965	579	deletion	2684	4.90	-
4:112347353-112358737	273	insertion	2925	12.80	-
4:112388873-112429900	273	deletion	15388	14.28	-
4:112578335-112621909	273	deletion	20476	6.43	-
4:112636473-112780593	273	deletion	264	9.18	-
4:112826707-112835853	273	deletion	2345	8.23	-
4:112893229-112897456	273	deletion	2577	10.28	-
4:112924910-112938521	273	deletion	7326	8.40	-
4:113032347-113096122	273	deletion	17684	7.85	-
4:115314997-115391075	6382	deletion	14300	5.07	-
4:115754385-115771231	6382	deletion	8450	5.13	-
4:117318059-117326300	154	deletion	4348	4.05	+
4:117930724-118078807	154	deletion	24310	6.52	+
4:122754488-122762287	7004	deletion	2151	6.97	+
4:122789234-122823794	7004	deletion	10597	6.71	+
4:123071163-123076238	6560	insertion	1752	4.61	-
4:124516881-124531822	515	deletion	2856	8.09	-
4:124615397-124674265	515	deletion	22337	5.28	-
4:124689000-124743321	515	deletion	10581	5.79	-
4:124767472-124780635	515	deletion	5724	6.03	-
4:124808273-124931505	515	deletion	111152	5.60	-
4:124969238-124979988	515	insertion	80365	7.85	-
4:125030265-125161722	515	deletion	9524	6.29	-
4:126539596-126561942	3298	deletion	7689	7.91	-
4:126588996-126635430	3298	deletion	7600	7.52	-
4:126661865-126772058	3298	deletion	12718	8.07	-
4:126867318-126895628	3298	deletion	9001	4.40	-
4:126965311-126980016	3298	deletion	3737	4.32	-
4:127035488-127056680	3298	deletion	13248	5.12	-
4:133801079-133811403	1288	deletion	3154	4.14	+
4:134098571-134132309	1602	deletion	14892	14.58	+
4:135133796-135137089	1187	deletion	2306	5.21	-
4:135178847-135189300	1187	deletion	2589	4.92	-
4:137402669-137416455	54	deletion	6844	6.25	-
4:137466963-137548509	54	deletion	17984	4.80	-
4:137654876-137673325	54	deletion	4608	17.43	-
4:137696813-137705257	54	deletion	3124	15.81	-
4:137776230-137824309	54	deletion	11963	18.20	-
4:137875873-137903603	54	deletion	5835	17.97	-
4:137972120-137990243	54	deletion	3382	9.63	-
4:138040002-138070502	54	deletion	8500	13.89	-
4:141563284-141569075	294	deletion	2753	7.02	+
4:141656160-141771592	294	deletion	22342	8.13	+
4:141807988-141817711	294	deletion	2912	10.23	+
4:141884119-141894340	294	deletion	2604	8.22	+
4:141929527-141938436	294	deletion	2463	5.94	+
4:142023831-142094345	294	deletion	24671	4.03	+
4:147002087-147023801	180	deletion	8175	4.07	+
4:152398531-152445963	1043	deletion	11565	5.92	+
4:163307358-163339605	383	deletion	9921	5.29	-
4:163366418-163453174	383	deletion	19932	5.60	-
4:168336526-168349399	40	deletion	2404	6.01	-
4:168404847-168492580	40	deletion	12518	14.20	-
4:168540071-168596035	40	deletion	7587	15.23	-
4:168695057-168719268	40	deletion	7851	22.22	-
4:168810603-168826237	40	deletion	3068	11.18	-
4:168861147-168872672	40	deletion	2891	11.42	-
4:168951690-169060501	40	deletion	25246	10.24	-
4:169102670-169140201	40	deletion	10085	10.44	-
4:169524152-169602112	1377	deletion	24265	11.89	+
4:169749604-169795744	1377	deletion	9125	5.96	+
4:169826845-169874694	1377	deletion	11381	6.52	+
4:169911832-169919161	1377	deletion	3355	6.18	+

Chromosome: 5

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
5:25015138-25025917	167	deletion	3879	4.75	+
5:27270251-27407486	153	deletion	31870	4.56	-
5:27508344-27512046	153	insertion	2842	14.73	-
5:27587882-27662238	153	deletion	4620	9.68	-
5:27685790-27710478	153	deletion	7419	12.44	-
5:27748562-27758124	153	deletion	3019	9.28	-
5:27774024-27991751	153	deletion	38088	9.87	-
5:28049848-28171879	153	deletion	19649	7.85	-
5:32572255-32583277	5477	deletion	7563	6.09	-
5:32836727-32868943	5477	deletion	9590	4.38	-
5:33977032-33993758	24	deletion	2864	4.34	+
5:34041389-34101486	24	deletion	13843	7.98	+
5:34250157-34367140	24	insertion	31445	9.02	+
5:34399580-34477640	24	deletion	69869	11.50	+
5:34552085-34613250	24	deletion	15186	8.75	+
5:34682230-34693245	24	deletion	2356	6.67	+
5:34755311-34898808	24	deletion	19715	7.77	+
5:34915473-35079173	24	deletion	34185	11.71	+
5:35147131-35235349	24	deletion	44824	7.20	+
5:35254514-35274277	24	insertion	14714	11.06	+
5:35407995-35523225	24	deletion	26122	5.42	+
5:35542595-35548850	24	deletion	3727	7.22	+
5:35573636-35711040	24	deletion	130199	5.01	+
5:35725342-35741338	24	insertion	104743	8.20	+
5:35757851-35774411	24	deletion	1581	4.01	+
5:35824148-35906499	24	deletion	17179	6.83	+
5:36251932-36282568	2179	deletion	4862	4.91	+
5:36892431-36917568	190	deletion	9561	8.00	+
5:36947333-36955662	190	deletion	2660	9.75	+
5:36997438-37073403	190	deletion	20703	7.27	+
5:38149556-38165698	495	deletion	6611	7.42	-
5:38183363-38206323	495	deletion	3620	7.13	-
5:38234108-38260165	495	deletion	7645	9.17	-
5:38278327-38298900	495	deletion	9136	8.23	-
5:38342134-38353052	495	deletion	6441	11.20	-
5:38438936-38475926	495	deletion	6879	7.01	-
5:38550370-38557092	495	deletion	4323	4.59	-
5:38916750-39065280	271	deletion	30900	11.37	+
5:39128225-39158085	271	deletion	18047	12.06	+
5:39221342-39232125	271	deletion	5949	12.56	+
5:39253450-39326700	271	deletion	12575	10.89	+
5:39381006-39387886	271	deletion	2270	9.64	+
5:39436675-39446643	271	deletion	2209	6.26	+
5:39507113-39594421	271	deletion	6790	6.38	+
5:39637788-39672982	271	deletion	6269	4.75	+
5:39700538-39802640	271	deletion	15945	5.89	+
5:43278875-43301461	1708	deletion	7797	4.29	-
5:45367406-45409734	3667	deletion	12258	5.14	-
5:45437819-45577969	3667	deletion	19230	4.85	-
5:45614497-45743766	3667	deletion	21430	4.66	-
5:45797053-45857790	3667	deletion	10963	5.51	-
5:45889198-45945227	3667	deletion	11314	6.23	-
5:45998037-46025890	3667	deletion	5677	6.84	-
5:50421584-50615963	2318	deletion	17554	6.43	-
5:54712021-54778861	925	deletion	13632	4.36	-
5:55075602-55087552	925	deletion	4334	5.35	-
5:55109459-55119041	925	deletion	2845	6.03	-
5:69096044-69115797	422	deletion	7053	4.21	+
5:69144215-69191293	422	deletion	10276	4.37	+
5:69702438-69742999	422	deletion	12822	4.27	+
5:71529269-71588945	157	deletion	11298	9.22	-
5:71632386-71791092	157	deletion	27592	8.70	-
5:71817944-71822970	157	deletion	3164	9.77	-
5:71862593-72036691	157	deletion	30705	6.91	-
5:72085047-72099229	157	deletion	2190	5.52	-
5:72164915-72174221	157	deletion	2636	6.67	-
5:80352548-80376546	21	deletion	11138	10.37	-
5:80410531-80452764	21	deletion	12239	9.39	-
5:80523384-80538275	21	deletion	8396	11.96	-
5:80609024-80634731	21	deletion	9140	11.87	-
5:80681856-80795913	21	deletion	14410	12.08	-
5:80833402-80884029	21	deletion	17733	10.98	-
5:81120488-81132500	21	deletion	2080	4.75	-
5:81165879-81214699	21	deletion	11463	14.49	-
5:98664571-98803578	803	deletion	19115	4.24	-
5:98842095-99022761	803	deletion	25792	5.88	-
5:99047632-99107534	803	deletion	12744	5.79	-
5:101207729-101239222	341	deletion	9423	4.14	+
5:101272563-101295526	341	deletion	8143	4.16	+
5:106176559-106258604	606	deletion	7663	5.10	+
5:108204954-108216381	60	deletion	2843	5.22	-
5:108251699-108420314	60	deletion	31720	5.80	-
5:108470180-108596995	60	deletion	11366	6.08	-
5:108661472-108709988	60	deletion	8379	4.26	-
5:109171381-109180877	60	deletion	2160	4.34	-
5:109611189-109738663	60	deletion	43931	6.60	-
5:110112071-110159901	60	deletion	9827	7.12	-
5:111312151-111424600	521	deletion	14120	4.52	-
5:112640457-112651152	36	deletion	8485	15.93	-
5:112687021-112718465	36	deletion	3217	4.22	-
5:112758376-112771785	36	deletion	3897	12.67	-
5:112789726-112806533	36	deletion	4891	13.79	-
5:112925752-113069031	36	deletion	25961	9.32	-
5:113143096-113150343	36	deletion	1745	4.84	-
5:113187569-113192738	36	deletion	3373	8.28	-
5:113231573-113237699	36	deletion	2690	8.26	-
5:113260640-113289722	36	deletion	5431	7.54	-
5:116562111-116604368	219	deletion	12301	6.29	-
5:116656028-116669198	219	deletion	3786	8.86	-
5:116710149-116772138	219	deletion	8005	10.67	-
5:121582822-121615972	117	deletion	11804	4.75	-
5:121763979-121782359	117	deletion	3839	6.27	-
5:121847587-121951565	117	deletion	19608	4.76	-
5:121984778-121997749	117	deletion	2756	6.06	-
5:122114085-122205365	117	deletion	17163	13.33	-
5:122291400-122308587	117	deletion	2543	5.03	-
5:122357906-122388410	117	deletion	6871	10.98	-
5:123704023-123759988	46	deletion	19816	4.00	-
5:123796384-123837884	46	deletion	8151	5.51	-
5:123852582-123872535	46	deletion	8221	5.07	-
5:123989934-124009434	46	deletion	5299	4.08	-
5:124245005-124290754	46	deletion	8574	5.23	-
5:124315108-124343967	46	deletion	5824	5.74	-
5:124372880-124385452	46	deletion	5936	4.89	-
5:124429369-124450992	46	deletion	11734	4.76	-
5:124489597-124517287	46	deletion	7505	4.46	-
5:124565260-124692141	46	deletion	38664	4.47	-
5:124719235-124732244	46	deletion	5534	6.64	-
5:124769016-124795970	5501	deletion	6187	6.07	-
5:130486556-130536016	99	deletion	10654	5.11	+
5:130567826-130587407	99	deletion	2621	4.63	+
5:130608584-130634794	99	deletion	9961	6.61	+
5:130675178-130683746	99	deletion	4065	6.31	+
5:130705451-130716179	99	deletion	4193	6.19	+
5:130759803-130892934	99	deletion	19685	4.64	+
5:132293471-132341806	96	deletion	10372	12.47	-
5:132373575-132419268	96	deletion	11556	13.28	-
5:132435197-132488271	96	deletion	13681	11.65	-
5:132518449-132591364	96	deletion	36649	14.50	-
5:132606143-132736884	96	deletion	19004	10.46	-
5:132764158-132784792	96	deletion	5753	10.32	-
5:132803275-132836281	96	deletion	8679	10.44	-
5:132938604-132994080	96	deletion	10204	13.82	-
5:133046738-133073327	96	deletion	6186	11.59	-
5:142583531-142688681	61	deletion	18567	6.12	+
5:144779854-144790352	1228	deletion	2752	4.54	-
5:146824725-146832035	111	deletion	2535	9.18	+
5:146868012-146954386	111	deletion	13632	7.32	+
5:146983315-146995547	111	deletion	4644	7.21	+
5:147104443-147124043	111	deletion	2892	6.01	+
5:147157884-147186673	111	insertion	1770	6.11	+
5:147899813-147917674	4029	deletion	10888	5.63	-
5:151942887-151959153	2032	deletion	4513	8.77	+
5:156971029-157070544	30	deletion	67933	6.43	+
5:157105767-157212978	30	insertion	15826	4.61	+
5:157316088-157352601	30	deletion	5226	8.72	+
5:157425246-157450916	30	deletion	5775	10.32	+
5:157489687-157492662	30	insertion	6277	13.07	+
5:157531004-157540856	30	deletion	2906	11.96	+
5:157564552-157570104	30	insertion	6607	15.64	+
5:157768978-157819233	30	deletion	19081	13.58	+
5:157854330-157919213	30	deletion	15575	14.14	+
5:157956289-158058619	30	deletion	19726	14.63	+
5:158137761-158150402	30	deletion	10728	14.51	+
5:158213156-158251074	30	deletion	9498	11.99	+
5:158355388-158374210	30	insertion	5064	10.50	+
5:158400518-158406187	30	insertion	2605	9.77	+
5:158482573-158488529	30	deletion	3455	5.57	+
5:158526251-158791349	30	deletion	54525	4.10	+
5:169194951-169270597	76	deletion	21570	4.81	+
5:169615465-169712740	76	deletion	15058	4.08	+
5:169813940-169821878	76	deletion	2509	6.41	+

Chromosome: 6

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
6:6006819-6031606	1613	deletion	5084	4.09	-
6:28025516-28051732	1754	deletion	4945	5.29	-
6:28077406-28100320	1754	deletion	5520	4.46	-
6:28185961-28241953	1754	deletion	10976	5.00	-
6:31043994-31050112	5988	deletion	2332	6.41	+
6:31340611-31390693	266	deletion	9698	7.88	+
6:31482855-31491328	266	deletion	3737	11.23	+
6:31525048-31674350	266	deletion	24535	10.93	+
6:31732949-31780356	266	deletion	18553	10.19	+
6:31813943-31822106	266	insertion	3718	10.09	+
6:31861172-31958210	266	deletion	178	9.78	+
6:32052595-32097099	266	deletion	16360	12.07	+
6:32144788-32255098	266	deletion	10026	11.43	+
6:32389257-32407251	266	deletion	2691	5.52	+
6:34990960-35115988	81	deletion	20882	5.78	+
6:35143697-35245891	81	deletion	33899	5.30	+
6:37304422-37484124	613	deletion	28225	8.08	-
6:37510452-37520691	613	deletion	2343	7.68	-
6:37561431-37572796	613	deletion	2050	6.52	-
6:37654749-37704715	613	deletion	8601	7.61	-
6:37749094-37761333	613	deletion	4969	7.52	-
6:37813655-37859424	613	deletion	10001	7.69	-
6:43873899-43887924	910	insertion	4817	5.76	-
6:54079247-54089063	105	deletion	3294	9.08	-
6:54173791-54274216	105	deletion	24292	5.99	-
6:54318572-54400510	105	deletion	15997	7.46	-
6:54439335-54447544	105	deletion	3236	7.50	-
6:54475873-54497291	105	deletion	5667	8.38	-
6:54583924-54588228	105	deletion	2502	7.09	-
6:54618339-54706733	105	deletion	76497	7.28	-
6:54723477-54853049	105	insertion	18334	5.95	-
6:55060444-55092028	105	deletion	8838	4.40	-
6:55178147-55198047	105	deletion	4618	6.93	-
6:55235789-55289791	105	deletion	25752	6.51	-
6:55323564-55373646	105	insertion	7121	5.25	-
6:55400228-55421946	105	deletion	6776	5.87	-
6:55500183-55505472	105	deletion	2713	6.80	-
6:55542062-55615213	105	deletion	9800	6.34	-
6:56410982-56594800	1046	deletion	28373	11.17	-
6:56639831-56660007	1046	deletion	4547	8.71	-
6:56694827-56705803	1046	deletion	2394	6.96	-
6:56824436-56833394	1046	deletion	2479	10.19	-
6:56881025-56985640	1046	deletion	17127	9.15	-
6:58096097-58143062	168	deletion	9845	10.11	+
6:58186239-58195088	168	insertion	2208	6.72	+
6:58229146-58234022	168	deletion	2328	12.11	+
6:58300580-58318761	168	deletion	3129	7.97	+
6:71389759-71403565	410	insertion	9527	7.04	+
6:71489796-71511049	410	deletion	9863	6.78	+
6:77103566-77173918	120	deletion	20827	4.15	-
6:77216574-77265133	120	deletion	10946	4.15	-
6:77302904-77316430	120	deletion	4497	5.98	-
6:79309913-79399864	6495	deletion	14626	5.15	+
6:79427814-79437191	6495	insertion	3643	5.96	+
6:79515175-79558776	6495	deletion	13757	4.94	+
6:91488652-91499100	462	deletion	2978	11.35	-
6:91591434-91790847	462	deletion	14756	13.67	-
6:91855816-91903760	462	deletion	12336	14.62	-
6:91934831-91987215	462	deletion	11928	14.31	-
6:92012817-92130790	462	deletion	7207	11.59	-
6:92142792-92248300	462	deletion	56909	8.23	-
6:92449444-92468415	462	deletion	6780	15.43	-
6:93917595-94054993	4115	deletion	27824	4.27	-
6:94365063-94377600	4115	deletion	4876	6.81	-
6:94727312-94734978	275	insertion	3856	21.72	+
6:94902759-94905616	275	insertion	68138	6.58	+
6:94943608-95031326	275	deletion	86095	7.21	+
6:95042004-95145305	275	deletion	16221	9.82	+
6:95663148-95669969	1401	deletion	2355	5.03	-
6:96153013-96159024	1574	insertion	6562	7.30	+
6:96543635-96599404	1259	deletion	30819	7.10	+
6:96649974-96700797	1259	deletion	8253	5.19	+
6:96747437-96760111	1259	deletion	2883	7.21	+
6:97906239-97919104	1019	deletion	4291	4.18	+
6:98708469-98751168	298	deletion	5864	8.31	-
6:98854066-98885844	298	deletion	4805	6.74	-
6:98931907-99012149	298	deletion	26646	8.08	-
6:99099248-99180148	298	deletion	8337	7.35	-
6:99212391-99345116	298	deletion	22699	9.44	-
6:99416789-99535297	298	deletion	17021	6.31	-
6:99578091-99597011	298	deletion	2740	5.08	-
6:102102500-102138013	836	deletion	4341	6.54	+
6:102155109-102175563	836	deletion	11525	7.69	+
6:102208300-102321972	836	deletion	27674	5.94	+
6:102362805-102476195	836	deletion	25558	6.31	+
6:102508351-102556477	836	deletion	9912	8.18	+
6:103358627-103381485	4420	deletion	2640	4.53	-
6:103500512-103525688	4420	deletion	7644	9.90	-
6:103550001-103562421	4420	deletion	2220	5.10	-
6:105603389-105610516	892	insertion	4955	7.35	+
6:105627249-105762561	892	deletion	31173	5.17	+
6:106141482-106163299	178	deletion	3657	7.46	-
6:106237178-106348088	178	deletion	15231	7.70	-
6:106492515-106544923	178	deletion	9659	8.15	-
6:106590652-106633679	178	deletion	9343	6.38	-
6:107121456-107137803	178	deletion	3803	4.60	-
6:107160624-107252734	178	deletion	10714	4.23	-
6:117828766-117842879	1268	deletion	2954	4.40	+
6:117936083-117942217	1268	deletion	1950	6.95	+
6:118005669-118020852	1268	deletion	4373	10.45	+
6:123714816-123778829	348	deletion	2513	5.39	-
6:124219971-124417556	348	deletion	43373	6.65	-
6:125370710-125390156	324	deletion	7428	13.02	+
6:125520848-125592659	324	deletion	9892	8.96	+
6:125674170-125683817	324	insertion	2726	8.07	+
6:125729394-125809599	324	deletion	12574	5.42	+
6:125856592-125923844	324	deletion	13762	5.34	+
6:126201716-126249331	324	deletion	9768	4.71	+
6:126282553-126315031	324	deletion	8647	7.90	+
6:129558994-129606090	1667	deletion	4046	5.84	-
6:129641218-129662284	1667	deletion	5931	4.48	-
6:147465563-147472447	1828	deletion	1889	5.11	-
6:159939469-160077973	103	deletion	28100	7.38	-
6:160139506-160153647	103	deletion	4244	7.57	-
6:160174061-160191438	103	deletion	6790	6.14	-
6:160262287-160267730	103	deletion	1799	4.80	-
6:161018695-161028684	210	deletion	2325	4.49	+
6:162733215-162737983	31	deletion	2364	8.60	-
6:162910684-163068980	31	insertion	51022	6.43	-
6:163108706-163275461	31	deletion	160853	11.91	-
6:163289494-163369515	31	insertion	43523	11.78	-
6:163479741-163505444	31	deletion	3575	6.76	-

Chromosome: 7

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
7:15546732-15575110	2525	deletion	6810	5.16	-
7:31766963-31786710	345	insertion	2194	4.67	+
7:31869722-31993135	345	deletion	32049	6.50	+
7:32036124-32054580	345	deletion	5492	6.86	+
7:32122993-32125580	345	insertion	5304	13.68	+
7:32174829-32323395	345	deletion	59555	9.36	+
7:32392238-32466246	345	deletion	28493	11.94	+
7:32495297-32506782	345	deletion	6399	11.47	+
7:32547254-32578863	345	deletion	7822	9.96	+
7:37549101-37604852	39	deletion	13683	4.08	+
7:37641269-37658383	39	deletion	3703	4.34	+
7:37791340-37796425	39	deletion	2971	4.63	+
7:40450360-40476277	1773	deletion	9961	4.16	+
7:43777665-43784342	580	deletion	2161	4.06	+
7:50561931-50573388	155	deletion	2547	7.28	-
7:50607440-50635705	155	deletion	4673	8.09	-
7:50658763-50669132	155	deletion	3078	8.05	-
7:53560796-53692263	3	deletion	25268	5.64	+
7:53730958-53875605	3	deletion	20889	6.93	+
7:55466329-55516290	1436	deletion	10475	4.21	+
7:62888383-62932792	979	deletion	7388	6.81	+
7:63009085-63047090	979	deletion	8744	6.32	+
7:63073713-63113982	979	deletion	7037	6.40	+
7:63213279-63224685	979	deletion	5416	5.32	+
7:70847088-70857088	590	insertion	5782	6.85	+
7:70983940-70988578	590	deletion	2615	12.26	+
7:71025038-71063495	590	deletion	7871	10.56	+
7:71123793-71230786	590	deletion	16599	7.80	+
7:72308684-72375758	6281	deletion	9061	5.42	+
7:72405764-72418265	6281	deletion	3095	7.33	+
7:72455510-72587442	6281	deletion	41854	4.61	+
7:72626028-72636366	6281	deletion	8340	4.36	+
7:72711172-72723955	6281	deletion	4138	4.42	+
7:82205245-82304065	161	deletion	5428	5.00	-
7:82349425-82467714	161	deletion	14578	4.17	-
7:82504662-82515247	161	deletion	2983	6.83	-
7:82604570-82628405	161	deletion	6930	9.46	-
7:82671624-82676458	161	deletion	2924	11.40	-
7:82749142-82782988	161	deletion	13509	11.49	-
7:82812644-82824903	161	deletion	2711	8.43	-
7:82918746-83004586	161	deletion	4746	16.21	-
7:83041368-83048960	161	deletion	2581	11.26	-
7:83090148-83096361	161	deletion	4646	15.52	-
7:83121054-83261039	161	deletion	4204	16.09	-
7:83275217-83358058	161	deletion	74290	15.50	-
7:83380815-83428317	161	deletion	13306	14.76	-
7:83444859-83614486	161	deletion	13759	11.75	-
7:83702203-83847229	161	deletion	29423	15.21	-
7:83982683-84218658	161	deletion	55934	14.31	-
7:84233746-84394837	161	deletion	2398	16.33	-
7:84425200-84636951	161	deletion	36981	13.07	-
7:84659613-84747248	161	deletion	6452	9.77	-
7:84810884-84921166	161	deletion	54694	9.42	-
7:84956620-85209936	161	insertion	2040	6.51	-
7:85327699-85332456	161	insertion	6713	10.89	-
7:87269259-87323620	715	deletion	10533	10.33	+
7:87348485-87357690	715	deletion	3182	12.09	+
7:87399973-87441413	715	deletion	6502	9.16	+
7:87477576-87483192	715	deletion	3544	8.81	+
7:88355974-88363361	583	deletion	3310	4.54	+
7:88413234-88429041	583	deletion	7833	5.17	+
7:88481200-88489077	583	deletion	1987	5.49	+
7:88530647-88539493	583	deletion	2084	4.25	+
7:88667136-88683283	583	deletion	5462	5.12	+
7:89794341-89930696	5650	deletion	30480	4.14	+
7:90026506-90059584	5650	deletion	7707	5.58	+
7:90093333-90115637	5650	deletion	5618	5.66	+
7:90200048-90217571	5650	deletion	5503	6.71	+
7:90241914-90251622	5650	deletion	2414	6.76	+
7:106268509-106289931	755	deletion	9887	5.48	-
7:106355210-106380392	755	deletion	9770	4.86	-
7:106476933-106547038	755	deletion	10723	8.67	-
7:106605678-106617659	755	deletion	5882	10.53	-
7:106669652-106684275	755	deletion	4476	13.37	-
7:106757085-106762067	755	deletion	3264	16.34	-
7:106815874-106829540	755	deletion	3703	14.35	-
7:106881814-106894806	755	deletion	2805	8.65	-
7:110711994-110731969	34	deletion	7597	13.91	+
7:110840217-110892974	34	deletion	6559	5.86	+
7:111596552-111608812	482	deletion	8127	6.49	-
7:111857855-111951081	482	deletion	15841	4.95	-
7:120977495-120990998	293	deletion	2321	4.12	-
7:121232573-121262665	293	deletion	6751	6.95	-
7:121292996-121412275	293	deletion	11332	5.37	-
7:121579182-121676871	293	deletion	21532	4.35	-
7:121729366-121800627	293	deletion	17039	5.94	-
7:124374802-124439273	5652	deletion	18060	5.15	+
7:124476882-124507022	5652	deletion	5032	5.58	+
7:124542336-124614519	5652	deletion	13107	5.58	+
7:124692303-124793869	5652	deletion	16539	9.58	+
7:124830220-124914999	5652	deletion	12540	9.54	+
7:124965854-125002416	5652	deletion	12691	11.09	+
7:125051512-125080945	5652	deletion	6119	10.86	+
7:126189337-126290602	110	deletion	13960	4.66	+
7:126362323-126374350	110	deletion	4163	7.16	+
7:126411687-126466282	110	deletion	10715	5.54	+
7:128338288-128349653	7303	deletion	2387	6.69	-
7:128383109-128398013	7303	deletion	2458	5.43	-
7:128505916-128511403	7303	deletion	2119	9.10	-
7:132353336-132367874	8	deletion	6148	4.67	+
7:132496740-132579675	8	deletion	13872	7.53	+
7:134088530-134100678	1164	deletion	6070	7.36	+
7:134121119-134154066	1164	deletion	1172	5.59	+
7:134183857-134198663	1164	deletion	6397	5.63	+
7:136302219-136312575	6769	deletion	3173	6.60	+
7:136777461-136784704	279	deletion	4222	5.61	-
7:136838728-136851550	279	deletion	2402	6.02	-
7:136938055-136988765	279	deletion	16317	6.37	-
7:137048119-137117780	279	deletion	14379	7.85	-
7:137139688-137171915	279	deletion	4715	7.69	-
7:137211399-137321749	279	deletion	3440	7.21	-
7:137354895-137472176	279	deletion	20170	4.76	-
7:137721902-137751425	279	deletion	14879	4.11	-
7:137914024-137976535	279	deletion	22770	14.60	-
7:138030550-138035785	279	deletion	3095	12.75	-
7:138118492-138129007	279	deletion	7463	8.83	-
7:138225657-138296442	279	deletion	18576	5.57	-
7:138338854-138489464	279	deletion	33555	7.44	-
7:143149501-143157954	915	deletion	6714	5.26	+
7:144520004-144551225	4321	deletion	3472	5.30	+
7:144590832-144725706	4321	deletion	20534	5.36	+
7:144767617-144815552	4321	deletion	14099	4.81	+
7:145349631-145424594	4321	deletion	21289	8.46	+
7:145441084-145541816	4321	deletion	17963	5.59	+
7:145581524-145805986	4321	deletion	88256	5.42	+
7:146034995-146056972	4321	deletion	15665	7.87	+
7:146085535-146101643	4321	insertion	8042	6.26	+
7:146192149-146203657	4321	insertion	9847	8.31	+
7:146325919-146339434	4321	deletion	3238	11.59	+
7:146982295-147001565	10915	deletion	8641	4.37	+
7:147271105-147388866	10915	deletion	14413	7.89	+
7:147998396-148014527	4779	deletion	4958	6.16	-
7:148051065-148177318	4779	deletion	27591	5.90	-
7:148290563-148403659	4779	deletion	29855	5.85	-
7:149140457-149151265	957	deletion	2692	8.75	+
7:149279461-149370619	957	deletion	18448	11.92	+
7:149440535-149537940	957	deletion	19723	13.18	+
7:149617588-149703980	957	deletion	19387	6.18	+
7:150069540-150093604	1419	deletion	6022	7.90	+
7:150141635-150158067	1419	deletion	4598	5.26	+
7:150180930-150220304	1419	deletion	5592	4.20	+
7:150896922-150903065	52	deletion	1698	4.96	+
7:150931851-150952945	52	deletion	7261	30.62	+
7:151083374-151102594	52	deletion	7626	34.01	+
7:151222700-151369111	52	deletion	28488	32.04	+
7:151472163-151558594	52	deletion	23469	30.28	+
7:151666973-151684400	52	deletion	6131	24.91	+
7:151706548-151787152	52	deletion	18042	24.11	+
7:151849398-151964525	52	deletion	25537	23.64	+
7:151988835-152002889	52	deletion	3452	14.14	+
7:152057342-152082291	52	deletion	5863	22.97	+
7:152248159-152256630	52	deletion	1905	4.48	+
7:153670170-153710429	928	deletion	4413	7.37	+
7:153821694-153883431	928	deletion	12725	7.96	+
7:154412647-154423451	934	deletion	3801	4.80	-
7:157119827-157129409	597	insertion	37935	4.54	-
7:159062537-159095347	762	deletion	13189	13.99	-
7:159359620-159391231	2103	deletion	10629	7.02	-
7:159426034-159434560	2103	deletion	5165	4.74	-
7:160246057-160275789	434	deletion	3703	4.26	-
7:160312225-160499409	434	deletion	32510	4.17	-
7:160590938-160612976	434	deletion	5616	9.94	-
7:160645286-160652776	434	deletion	3262	10.41	-
7:160713891-160732804	434	deletion	3311	8.94	-
7:160767884-160784693	434	deletion	2655	5.98	-
7:160850129-160912398	434	deletion	8266	17.34	-
7:160959978-160974921	434	deletion	3624	14.80	-
7:161119193-161186422	434	deletion	11693	6.38	-

Chromosome: 8

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
8:6188709-6218468	317	deletion	7451	8.27	+
8:6250710-6321225	317	deletion	17844	9.93	+
8:6352964-6365187	317	deletion	3288	10.28	+
8:6413872-6441121	317	deletion	5723	10.32	+
8:6535544-6553063	317	deletion	6344	7.67	+
8:6593736-6651391	317	deletion	11713	5.28	+
8:9006010-9014394	2690	deletion	3288	5.58	+
8:10641358-10716200	144	deletion	14646	7.20	+
8:10747332-10877183	144	deletion	22679	5.04	+
8:10956367-11009023	144	deletion	10945	6.68	+
8:11168308-11181244	144	deletion	2935	4.80	+
8:12819395-12844631	337	deletion	4277	9.38	+
8:12891589-12918121	337	deletion	6608	8.13	+
8:13047057-13071469	337	deletion	7457	6.58	+
8:13093964-13251977	337	deletion	21826	5.94	+
8:13271355-13279868	337	deletion	2979	7.66	+
8:13295076-13305837	337	deletion	2102	6.06	+
8:25824854-25899035	1345	deletion	12749	4.66	-
8:26831204-26966415	1345	deletion	29974	4.41	-
8:33216733-33231889	1544	deletion	4807	7.85	+
8:33291337-33385396	1544	deletion	19298	4.01	+
8:35533628-35669251	542	deletion	26218	5.74	-
8:35800491-35889301	542	deletion	19174	4.77	-
8:35922937-35939032	542	deletion	5723	5.60	-
8:37553814-37569584	189	deletion	6621	7.41	-
8:37598841-37763742	189	insertion	22558	5.85	-
8:48863471-48881438	312	deletion	6830	4.77	+
8:51377008-51458986	119	deletion	5220	4.53	+
8:52033974-52043323	119	insertion	6345	4.61	+
8:69442524-69504174	3332	deletion	22535	5.34	+
8:74131229-74206338	3779	deletion	10710	4.75	-
8:74253677-74397234	3779	deletion	21476	4.27	-
8:74459116-74464810	3779	deletion	2748	5.64	-
8:75480995-75531396	632	deletion	9264	14.70	-
8:75552042-75556551	632	insertion	1715	6.50	-
8:75600691-75609421	632	deletion	3133	15.15	-
8:75639664-75656665	632	deletion	6235	14.65	-
8:85693886-85733193	392	deletion	9860	11.32	-
8:88405187-88569623	937	deletion	25493	4.91	+
8:88619578-88629664	937	insertion	2588	5.69	+
8:88657438-88670706	937	insertion	4418	4.97	+
8:91882057-91939422	3212	deletion	9050	31.00	-
8:93855776-93864854	6369	insertion	3200	4.09	+
8:93922813-93926919	6369	deletion	2904	4.02	+
8:97994961-98075075	125	deletion	17416	4.30	-
8:98122635-98186397	125	deletion	7889	6.60	-
8:99268543-99281329	5580	deletion	2603	7.40	-
8:99621025-99629851	670	deletion	2955	11.14	-
8:99649112-99743249	670	deletion	16801	6.93	-
8:100965251-100982476	902	deletion	4496	4.56	+
8:102025773-102108925	232	deletion	14642	4.53	-
8:102259044-102273921	232	deletion	7642	5.75	-
8:102298986-102456866	232	deletion	26718	7.14	-
8:103049079-103147376	669	deletion	22542	9.97	+
8:103169812-103182733	669	deletion	2279	5.23	+
8:103208789-103315466	669	deletion	25516	4.69	+
8:103365315-103373201	669	deletion	6623	11.06	+
8:115339357-115346652	831	deletion	2219	6.56	-
8:115406392-115420523	831	deletion	9011	5.84	-
8:115501953-115524771	831	deletion	4701	5.65	-
8:116230861-116260907	1542	deletion	7319	5.00	+
8:117560151-117625670	2568	deletion	14885	6.02	-
8:125887365-125894842	3727	deletion	1903	5.76	-
8:125959448-125968739	3727	deletion	3898	5.31	-
8:126106261-126119310	3727	deletion	7042	4.78	-
8:126849753-126863535	1968	deletion	5591	4.37	-
8:132714601-132790099	55	deletion	24819	5.20	+
8:133038858-133051482	55	deletion	2587	6.10	+
8:133115797-133151014	55	deletion	25379	5.45	+
8:134282755-134384146	355	deletion	13535	4.15	-
8:134424291-134511019	355	deletion	18564	4.66	-
8:134639040-134729662	355	deletion	19269	8.23	-
8:137753898-137760677	4	deletion	2974	6.77	-
8:137982867-137993916	4	deletion	2233	5.34	-
8:138058513-138088671	4	deletion	23534	8.36	-
8:138131087-138195921	4	deletion	5030	10.81	-
8:138209083-138287516	4	deletion	18613	8.07	-
8:138333972-138341817	4	deletion	3929	9.74	-
8:138378004-138387938	4	deletion	5986	10.37	-
8:138432979-138492557	4	deletion	12619	9.26	-
8:138566680-138681126	4	deletion	17601	9.24	-
8:138730417-138739080	4	deletion	2479	10.53	-
8:138811931-138869496	4	deletion	18204	10.85	-
8:138925332-138939135	4	deletion	7487	9.68	-
8:138971307-139082360	4	deletion	14027	7.48	-
8:139127846-139192516	4	deletion	15201	6.38	-
8:139233942-139428277	4	deletion	48262	7.21	-
8:139444195-139564078	4	deletion	20450	10.98	-
8:139629733-139652336	4	deletion	5791	11.56	-
8:139683220-139817767	4	deletion	28466	11.13	-
8:139892997-139927914	4	deletion	3572	4.34	-
8:140717222-140735165	301	deletion	4293	5.68	+

Chromosome: 9

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
9:12662716-12668401	1709	deletion	2292	5.56	+
9:12820627-12914932	706	deletion	12751	7.46	-
9:12951036-12980363	706	deletion	10736	7.20	-
9:13019227-13041573	706	deletion	4757	7.16	-
9:13091623-13223152	706	deletion	28173	4.99	-
9:13273063-13322909	706	deletion	11146	6.20	-
9:14009679-14042509	706	deletion	7453	7.54	-
9:14096253-14143667	706	deletion	8016	7.26	-
9:14171461-14201376	706	deletion	7311	7.19	-
9:14265551-14290286	706	deletion	4526	4.81	-
9:19675880-19685237	185	deletion	2482	6.61	-
9:21175318-21224796	813	deletion	8635	4.15	+
9:21260174-21323436	813	deletion	12435	5.98	+
9:27647600-27684225	4916	deletion	9739	10.76	-
9:27744941-27759194	4916	deletion	2601	6.58	-
9:27993632-28074946	4916	deletion	4518	5.94	-
9:28300527-28309037	959	deletion	4043	9.47	+
9:28504714-28545549	959	deletion	12071	28.78	+
9:28666422-28675488	959	deletion	2354	7.93	+
9:29303690-29324483	1967	deletion	4166	6.01	+
9:29732974-29989452	35	deletion	47379	5.46	-
9:30100284-30224618	35	deletion	39537	4.68	-
9:30268182-30284845	35	deletion	6278	5.13	-
9:30405170-30445538	35	deletion	8964	4.85	-
9:30479471-30572092	35	deletion	10292	4.12	-
9:30586659-30612752	35	deletion	6539	6.88	-
9:34574352-34591409	86	deletion	6874	7.02	-
9:41122651-41131440	304	deletion	2169	6.33	-
9:41180514-41193248	304	deletion	2158	4.61	-
9:41212816-41255093	304	deletion	13729	4.26	-
9:41297234-41346113	304	deletion	12817	5.59	-
9:41557976-41568592	5759	deletion	5397	8.83	-
9:41587805-41686454	5759	deletion	21948	5.41	-
9:41704579-41710718	5759	deletion	1942	5.00	-
9:41747966-41756735	5759	deletion	2411	7.14	-
9:41804903-41833635	5759	deletion	6435	5.19	-
9:41895488-41940131	5759	deletion	5931	5.00	-
9:41960484-41965806	5759	deletion	1712	5.64	-
9:43123229-43135885	564	deletion	4219	4.88	+
9:43217684-43234204	564	deletion	3574	5.96	+
9:43269169-43274709	564	deletion	3870	6.19	+
9:43301293-43313762	564	deletion	2402	6.20	+
9:43344044-43356999	564	deletion	6904	7.64	+
9:43391984-43407415	564	deletion	3130	9.05	+
9:43432847-43450971	564	deletion	4765	9.03	+
9:43734851-43762737	655	deletion	4328	15.04	-
9:43798006-43900241	655	deletion	25697	12.84	-
9:47045863-47056180	3770	deletion	2510	6.35	-
9:47136952-47240939	3770	deletion	22272	7.41	-
9:47277556-47284412	3770	deletion	3252	7.06	-
9:47355358-47467726	3770	deletion	21841	8.37	-
9:47538197-47629073	3770	deletion	26580	8.37	-
9:47689032-47792091	3770	deletion	12452	8.35	-
9:47839005-47855779	3770	deletion	6111	10.59	-
9:47879110-47907672	3770	deletion	21199	10.00	-
9:47929809-48128246	3770	deletion	29663	8.62	-
9:48163565-48200968	3770	deletion	7396	8.97	-
9:48253815-48255649	3770	insertion	2423	10.80	-
9:48304640-48379299	3770	deletion	10721	7.16	-
9:48420761-48441406	3770	deletion	3565	4.85	-
9:49976203-50054549	763	deletion	12039	9.03	+
9:50093167-50140435	763	deletion	12814	9.51	+
9:50192508-50288934	763	deletion	5764	7.88	+
9:50365247-50489931	763	deletion	22520	7.42	+
9:51473620-51492618	216	deletion	5215	5.50	+
9:52005816-52123881	216	deletion	88313	4.63	+
9:52136244-52201956	216	insertion	63267	6.90	+
9:52257657-52283632	216	deletion	5895	8.16	+
9:52324056-52430392	216	deletion	21338	6.16	+
9:52480047-52506905	216	deletion	5993	6.71	+
9:53090410-53100089	1806	deletion	2025	4.35	-
9:54097680-54113895	3917	deletion	4080	6.03	+
9:54234141-54243265	3917	deletion	1862	4.42	+
9:54328251-54344003	3917	deletion	6154	12.07	+
9:54390119-54413934	3917	deletion	8256	11.60	+
9:54495653-54499620	3917	insertion	1741	4.91	+
9:57464521-57479784	283	deletion	7627	5.21	-
9:57747494-57765751	283	deletion	12003	5.31	-
9:59425232-59436009	1011	deletion	3106	7.01	-
9:60242779-60252950	599	deletion	2055	4.94	-
9:60294294-60324843	599	deletion	8536	8.13	-
9:60364241-60372492	599	deletion	3221	9.10	-
9:60443590-60501954	599	deletion	17033	4.18	-
9:60838262-60985152	487	deletion	32955	4.77	+
9:61040474-61170516	487	deletion	27052	7.31	+
9:61210703-61221864	487	deletion	4879	7.24	+
9:61241874-61300677	487	deletion	23353	4.56	+
9:61395476-61404035	487	deletion	4084	9.94	+
9:61434025-61471749	487	deletion	9632	8.94	+
9:61534545-61620160	487	deletion	14114	8.11	+
9:61682649-61697989	487	deletion	4219	11.88	+
9:61720927-61792318	487	deletion	5807	10.94	+
9:63172292-63197945	811	deletion	3754	4.37	-
9:63670935-63707399	530	deletion	8877	5.08	+
9:64038701-64132189	530	deletion	10484	14.36	+
9:64166142-64197149	530	deletion	4172	15.04	+
9:64302882-64312043	530	deletion	2730	6.28	+
9:64557871-64565222	530	deletion	3023	5.49	+
9:65491990-65495881	2449	deletion	2023	8.44	-
9:68937494-69056311	732	deletion	31018	5.43	+
9:69981983-69995454	660	deletion	6245	7.50	+
9:70071149-70109775	660	deletion	12797	8.44	+
9:70349421-70399828	660	insertion	8107	6.15	+
9:71443618-71474661	888	deletion	4601	10.66	+
9:77328641-77332103	1981	deletion	1958	4.25	+
9:92300423-92412131	749	deletion	24612	5.07	+
9:92454845-92460449	749	deletion	3070	4.28	+
9:92672221-92683769	749	insertion	4112	5.55	+
9:92837153-92841642	749	insertion	4727	8.09	+
9:93268567-93341709	1462	insertion	2862	10.26	+
9:93417461-93445661	1462	deletion	7470	7.93	+
9:93516023-93613510	1462	deletion	16060	7.31	+
9:93648462-93690403	1462	deletion	6430	8.14	+
9:105141932-105243719	5619	deletion	13693	5.45	-
9:110580990-110640300	1526	deletion	6890	8.30	+
9:116121156-116141838	8747	deletion	3316	5.41	-
9:116540442-116543940	107	deletion	2317	5.37	+
9:116707410-116841173	107	deletion	25614	6.15	+
9:116907472-116935518	107	deletion	10379	6.68	+
9:116967922-116990629	107	deletion	6380	6.67	+
9:117034011-117095500	107	deletion	15271	6.57	+
9:117154731-117232298	107	deletion	22870	6.44	+
9:117274684-117333091	107	deletion	18250	4.69	+
9:122341350-122352606	159	deletion	4403	9.86	-
9:122386758-122430164	159	insertion	7553	8.33	-
9:122975590-123026282	159	deletion	7684	4.84	-
9:125844935-125858465	1282	deletion	7018	5.66	+
9:125871742-125881016	1282	deletion	5304	4.38	+
9:125950191-125955139	1282	deletion	2516	5.56	+
9:125971996-125988972	1282	deletion	5644	5.45	+
9:126026808-126057231	1282	deletion	4474	4.04	+
9:126621536-126636398	1327	deletion	3478	4.54	-
9:126653326-126671933	1327	deletion	4170	4.50	-
9:131248315-131261148	139	insertion	3564	14.65	+
9:131343315-131373791	139	deletion	7541	20.99	+
9:131458085-131512052	139	deletion	10690	13.28	+
9:131555879-131559559	139	insertion	7198	12.07	+
9:131623324-131704615	139	deletion	12383	8.08	+
9:132854505-132866163	384	deletion	7207	4.33	+
9:132916387-133085808	384	deletion	39011	5.73	+
9:133108570-133124400	384	deletion	5241	4.06	+
9:133183757-133257038	384	deletion	13319	4.61	+
9:133733036-133757471	6859	deletion	4894	4.09	+

Chromosome: 10

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
10:2240508-2407278	416	deletion	20121	4.26	-
10:22724249-22745213	3517	deletion	3942	6.45	+
10:26248874-26257896	429	deletion	2066	5.82	-
10:26413304-26427256	429	insertion	36103	4.14	-
10:26821312-26866801	429	deletion	11276	4.65	-
10:43362893-43373739	457	deletion	2872	6.58	+
10:43434111-43546138	457	deletion	32894	6.70	+
10:43633382-43743297	457	deletion	19700	7.38	+
10:43830158-43937160	457	deletion	38183	7.56	+
10:43970116-43981415	457	deletion	2045	4.55	+
10:44226091-44232793	975	deletion	1797	4.55	-
10:63031282-63048390	305	deletion	7817	11.59	+
10:63068559-63077400	305	deletion	2431	8.96	+
10:63121525-63151681	305	deletion	4412	8.83	+
10:65635866-65643007	595	deletion	3050	8.00	-
10:65663944-65774598	595	deletion	35058	6.48	-
10:65833888-65842964	595	deletion	5215	4.44	-
10:72943342-72989940	489	deletion	8409	11.89	+
10:73076955-73109588	489	deletion	7913	4.71	+
10:73133456-73141241	489	deletion	3042	5.51	+
10:81547028-81574100	656	deletion	8109	4.55	-
10:81625121-81633237	656	deletion	2117	5.92	-
10:86239157-86272511	4280	deletion	5447	6.56	-
10:86302853-86316844	4280	deletion	2403	5.13	-
10:86335283-86345989	4280	deletion	2153	4.36	-
10:90024533-90108485	851	deletion	22490	4.56	+
10:92552219-92555118	1942	insertion	1855	9.52	+
10:92654187-92750565	1942	deletion	22366	6.63	+
10:93652033-93662086	1078	deletion	2560	5.33	-
10:93739258-93879030	1078	deletion	18573	4.54	-
10:102556392-102674225	37	deletion	24075	5.77	-
10:102706630-102733668	37	deletion	5401	6.41	-
10:102762094-102790365	37	deletion	6929	5.42	-
10:102957768-103104866	37	deletion	32244	4.79	-
10:103147299-103161399	37	deletion	5151	6.06	-
10:103189615-103220531	37	deletion	8998	5.98	-
10:134758767-134772311	395	insertion	2234	5.28	-
10:136184881-136186452	5246	insertion	2144	4.50	-
10:136243763-136258708	5246	deletion	5429	5.21	-
10:136296836-136381646	5246	deletion	13859	4.15	-

Chromosome: 11

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
11:333343-382084	2989	deletion	14608	4.25	-
11:6476066-6539955	3812	deletion	24952	7.03	-
11:10399759-10523520	5127	deletion	11175	4.23	-
11:18065925-18099717	667	deletion	8989	4.57	-
11:18151448-18191154	667	deletion	9555	4.86	-
11:18242746-18278007	667	deletion	7684	8.48	-
11:20153317-20190182	1235	deletion	9918	5.73	+
11:20581749-20740743	1235	deletion	36428	4.52	+
11:20817843-20873988	1235	deletion	17060	4.43	+
11:20914525-21000500	1235	deletion	21028	4.88	+
11:23518992-23610426	176	deletion	10615	6.61	-
11:23643302-23684418	176	deletion	6969	5.81	-
11:23755234-23782838	176	deletion	19364	4.83	-
11:23826915-23908374	176	deletion	10053	4.83	-
11:23963774-23979531	176	deletion	4894	9.53	-
11:24011543-24129860	176	deletion	15975	6.30	-
11:24176132-24311922	176	deletion	5869	6.43	-
11:24344979-24375208	176	deletion	13738	6.04	-
11:30511757-30530991	2093	deletion	7439	6.28	+
11:33105072-33112336	678	deletion	1759	4.71	-
11:33152239-33159209	678	deletion	2944	4.69	-
11:34628372-34801127	66	deletion	48000	5.59	+
11:34837810-34845522	66	deletion	2092	5.58	+
11:35082483-35176674	66	deletion	9392	5.95	+
11:35261904-35270032	66	deletion	2384	5.78	+
11:35306600-35312092	66	deletion	1694	5.37	+
11:35356175-35476576	66	deletion	18636	5.63	+
11:35493493-35512495	66	deletion	4596	7.41	+
11:35576752-35755477	66	deletion	40039	5.00	+
11:36254459-36264077	520	deletion	2241	7.24	+
11:36369406-36381221	520	deletion	3271	10.80	+
11:36454677-36468937	520	deletion	2696	7.60	+
11:36524048-36540083	520	deletion	2287	4.11	+
11:37459868-37469978	1458	deletion	3550	5.08	-
11:37549230-37593512	1458	deletion	14153	4.57	-
11:49661451-49698241	4870	deletion	5013	4.80	+
11:52844202-52866803	3868	insertion	2940	6.88	+
11:52912375-53009171	3868	deletion	25135	8.28	+
11:53064349-53108929	3868	deletion	6371	8.49	+
11:53151376-53185385	3868	deletion	21256	7.57	+
11:56382885-56403610	370	deletion	4458	4.52	+
11:56518843-56524005	950	deletion	2957	4.87	-
11:63091738-63136482	759	deletion	10187	5.66	+
11:63222955-63234725	759	deletion	6768	9.03	+
11:63340678-63355714	759	deletion	12877	4.22	+
11:64229876-64249374	770	deletion	11455	5.32	-
11:67438268-67545072	7	deletion	18132	6.24	-
11:67604800-67626579	7	deletion	17057	5.08	-
11:67684806-67734038	7	deletion	11489	6.96	-
11:67871247-67881947	7	deletion	2358	6.87	-
11:67904029-68005584	7	deletion	15571	15.17	-
11:68119263-68207398	7	deletion	22532	11.29	-
11:68234738-68259132	7	deletion	6689	13.82	-
11:68326785-68466727	7	deletion	39221	16.16	-
11:68542082-68631790	7	deletion	14691	14.50	-
11:68695302-68703794	7	deletion	7068	16.28	-
11:68754129-68786243	7	insertion	2510	7.71	-
11:68809489-68942184	7	deletion	26327	13.43	-
11:68973711-68993876	7	deletion	9992	16.18	-
11:70599048-70606473	558	insertion	3383	5.99	-
11:73757281-73766825	3293	deletion	2592	4.88	+
11:82578232-82592287	1354	deletion	2374	5.30	+
11:82617712-82666933	1354	deletion	17364	5.13	+
11:82689677-82719752	1354	deletion	9883	6.64	+
11:82738994-82744466	1354	deletion	2432	6.91	+
11:88521818-88529122	5290	deletion	2166	4.80	+
11:88761851-88780031	2227	deletion	5351	4.09	-
11:89823747-89838254	1167	deletion	4396	8.37	-
11:89931224-89966228	1167	deletion	6109	8.25	-
11:90368259-90489612	5475	deletion	23661	11.65	-
11:90527605-90698723	5475	deletion	49336	10.00	-
11:90724139-90958617	5475	deletion	85909	7.33	-
11:91496305-91515229	5475	deletion	6331	4.02	-
11:91912578-92024110	456	deletion	21329	6.46	-
11:92069160-92149054	456	deletion	14349	6.31	-
11:93837363-93845402	1	deletion	3206	10.64	+
11:93869727-93892323	1	deletion	7149	10.37	+
11:93931487-93943379	1	deletion	2946	10.50	+
11:94050251-94144325	1	deletion	10130	14.11	+
11:94205307-94283680	1	deletion	16064	12.24	+
11:94327821-94428732	1	deletion	18500	11.53	+
11:94501587-94519452	1	deletion	10295	9.16	+
11:94578157-94590829	1	deletion	7881	10.71	+
11:94614979-94643592	1	deletion	6682	11.59	+
11:94692832-94698427	1	deletion	2331	7.77	+
11:98026206-98053535	204	deletion	7800	7.85	-
11:98102410-98234716	204	deletion	19040	7.64	-
11:98281452-98365823	204	deletion	11850	6.32	-
11:98435773-98614260	204	deletion	37011	7.81	-
11:98646256-98662154	204	deletion	3777	7.11	-
11:105895256-105900165	730	deletion	3085	6.80	-
11:105933939-105960701	730	deletion	5060	5.73	-
11:105994083-106090972	730	deletion	25148	4.72	-
11:106175319-106180451	730	deletion	2434	6.93	-
11:108083921-108108514	581	deletion	6288	6.02	+
11:108159584-108187382	581	deletion	6703	7.60	+
11:108207536-108213197	581	deletion	3904	7.36	+
11:110570630-110582446	543	insertion	73388	8.40	-
11:110607971-110740111	543	deletion	108437	10.02	-
11:110762501-110767330	543	deletion	2656	9.71	-
11:110791448-110800014	543	deletion	2977	8.68	-
11:110818646-110856844	543	deletion	10111	7.46	-
11:110902771-110910194	543	deletion	2508	4.87	-
11:111280069-111336161	1212	deletion	18218	4.42	-
11:112849225-112857015	5887	deletion	2545	5.06	+
11:112879541-112887966	5887	deletion	2495	5.06	+
11:112912812-112923397	5887	deletion	4964	5.03	+
11:114353004-114599258	314	deletion	36667	9.36	-
11:119270345-119288218	203	deletion	8879	4.94	-
11:119323505-119348297	203	deletion	2918	4.51	-
11:119423132-119465488	203	deletion	10768	9.05	-
11:119514090-119528213	203	deletion	9803	8.83	-
11:119559688-119741923	203	deletion	25484	6.77	-
11:119770491-119825617	203	deletion	8014	9.49	-
11:119851936-119969667	203	deletion	14824	5.92	-
11:120089095-120095101	203	deletion	1921	6.81	-
11:120116632-120244194	203	deletion	12777	8.07	-
11:120281229-120416888	203	deletion	19164	8.71	-
11:120495269-120505189	203	deletion	2826	7.75	-
11:120530261-120556519	203	deletion	4939	8.54	-
11:120634807-120649860	203	deletion	3236	8.23	-
11:121366458-121434664	1097	deletion	13910	4.02	-
11:121500982-121514602	1097	deletion	4325	9.52	-
11:121553056-121626565	1097	deletion	14989	5.70	-
11:121652002-121659706	1097	deletion	2433	5.59	-
11:122698103-122743336	1131	insertion	10631	5.34	+
11:122786203-122819193	1131	deletion	11953	7.68	+
11:124439216-124611172	2301	deletion	29044	5.49	-
11:124639669-124646788	2301	deletion	1734	4.62	-
11:124694325-124756380	2301	deletion	8624	6.25	-
11:124806564-124889699	2301	deletion	20646	4.52	-
11:125682697-125819502	1027	deletion	33541	4.06	-
11:126048383-126058757	1027	deletion	2893	6.36	-
11:126102996-126143977	1027	deletion	16665	4.27	-
11:126218875-126392743	1027	deletion	25922	7.80	-
11:126439220-126455450	1027	deletion	3722	9.95	-
11:126486266-126535439	1027	deletion	14290	9.40	-
11:128467071-128472789	1152	deletion	2780	10.34	+
11:128492748-128505236	1152	deletion	6636	11.81	+
11:128584494-128689110	1152	deletion	22057	8.12	+
11:128757841-128778616	1152	deletion	10709	6.92	+
11:129338605-129351651	447	deletion	4127	5.13	+
11:130901284-130971562	1234	deletion	16761	4.30	-
11:131693269-131704116	1740	deletion	4087	6.77	-
11:131787219-131834088	1740	deletion	9744	7.97	-
11:131976774-131985613	513	deletion	2906	4.21	-
11:132909076-132919884	151	deletion	2232	5.95	-
11:133088128-133128965	151	deletion	20035	6.47	-
11:133150522-133161083	151	deletion	2571	5.97	-
11:133181600-133193773	151	deletion	4644	6.25	-
11:133223818-133237895	151	deletion	2427	5.52	-

Chromosome: 12

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
12:2447020-2458684	90	deletion	3114	5.02	+
12:2500397-2555314	90	deletion	8643	5.17	+
12:2797205-2822144	90	deletion	7027	4.42	+
12:9468008-9490173	663	deletion	13172	4.12	-
12:11456313-11469998	844	deletion	5556	4.03	-
12:15163269-15182458	1546	deletion	2810	6.01	-
12:15219737-15273338	1546	deletion	8274	5.79	-
12:15645269-15653093	274	deletion	2280	5.58	+
12:26931590-26939369	1372	deletion	2744	5.29	+
12:29239069-29276536	1948	deletion	8677	7.29	-
12:29512043-29542111	1948	deletion	3155	5.10	-
12:29791999-29809201	2538	deletion	3302	7.32	-
12:30155902-30338531	243	deletion	10023	7.52	+
12:30366944-30490988	243	deletion	27352	4.98	+
12:30968914-30983393	243	deletion	5369	8.32	+
12:30998941-31023591	243	deletion	4016	8.49	+
12:31142040-31261640	243	deletion	25486	4.38	+
12:31397984-31497820	243	deletion	30995	5.13	+
12:33320072-33349957	5076	deletion	8890	5.08	+
12:53666172-53733696	228	deletion	21361	4.48	+
12:55508941-55614122	651	deletion	10581	5.16	-
12:55658844-55705658	651	deletion	24508	5.53	-
12:55875456-55898674	651	deletion	4216	5.33	-
12:56056224-56068593	166	deletion	2843	8.55	+
12:56180415-56190524	166	deletion	5410	7.85	+
12:56231689-56273473	166	deletion	5820	6.56	+
12:56311454-56326489	166	deletion	2999	7.84	+
12:56365500-56372905	166	deletion	2273	5.98	+
12:74451354-74550666	77	deletion	26800	6.69	+
12:74995283-75086309	1208	deletion	15514	6.13	+
12:86738331-86754919	6391	deletion	3864	5.98	+
12:88389799-88402093	6876	deletion	2365	4.05	-
12:90245578-90258583	3705	deletion	7020	6.95	+
12:91730028-91760994	889	deletion	6763	7.27	-
12:92297342-92302105	260	deletion	2429	4.50	+
12:92330888-92353244	260	deletion	6049	4.20	+
12:92570776-92584325	260	deletion	4711	4.98	+
12:92641264-92720079	260	deletion	7780	4.57	+
12:92756088-92772152	260	deletion	2816	5.15	+
12:97835988-97848496	1720	insertion	3110	5.69	+
12:97935034-97992790	1720	deletion	8157	4.65	+
12:99355486-99398968	1676	insertion	6271	4.88	-
12:99431154-99527879	1676	deletion	10866	4.21	-
12:108842749-108860320	444	deletion	3873	7.89	-
12:108890493-108896654	444	deletion	2790	8.88	-
12:108944682-109090793	444	deletion	21262	5.44	-
12:109171669-109181076	444	deletion	2024	5.03	-
12:113811488-113883756	897	deletion	10474	4.94	-
12:114108563-114128280	897	deletion	6182	4.24	-
12:114144893-114173522	897	deletion	4299	4.50	-
12:117566782-117577665	814	deletion	4314	6.00	+
12:117597567-117612470	814	deletion	4623	5.83	+
12:117674878-117688615	814	deletion	2852	9.65	+
12:117720059-117735109	814	deletion	3261	7.66	+
12:117754886-117921061	814	deletion	26695	7.89	+
12:117950262-118024008	814	deletion	16948	10.05	+
12:118505863-118557200	5908	deletion	18777	5.08	-
12:118587060-118595912	5908	deletion	1932	5.15	-
12:119828010-119836400	607	deletion	2134	6.56	+
12:121331310-121338770	401	deletion	3373	4.63	+
12:122520693-122622843	461	deletion	22318	5.96	-
12:122655204-122668636	461	deletion	2705	5.95	-
12:122732389-122825401	461	deletion	17390	5.59	-
12:122879146-122998110	461	deletion	24580	4.76	-
12:123071027-123074878	461	insertion	6966	4.05	-
12:123262167-123280669	585	deletion	5204	6.44	+
12:123331167-123380781	585	deletion	229	6.67	+
12:123417752-123459398	585	deletion	6151	5.26	+
12:123562280-123624511	585	deletion	15612	6.57	+
12:123685602-123717999	585	deletion	7440	5.21	+
12:127720564-127831686	441	deletion	22675	4.27	+
12:127900497-127908669	441	deletion	5035	7.57	+
12:127962582-127978309	441	deletion	8348	7.21	+
12:128058297-128120699	441	deletion	3356	6.39	+
12:128135460-128277447	441	deletion	15472	6.71	+
12:128346418-128356021	441	insertion	3636	6.72	+
12:128606412-128722342	183	deletion	10406	5.88	-
12:128813320-128916462	183	deletion	14564	7.89	-
12:128932367-129015897	183	deletion	25608	8.57	-
12:129175865-129354836	183	deletion	12079	4.15	-
12:129383488-129474248	183	deletion	14617	6.46	-
12:130724946-130915093	734	deletion	129348	4.56	+
12:131019749-131042284	734	insertion	4101	4.43	+

Chromosome: 13

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
13:255742-263869	1503	insertion	1888	4.91	+
13:296487-297439	1503	insertion	9057	6.89	+
13:367056-414865	1503	deletion	228	4.07	+
13:6801220-6818886	624	deletion	5369	4.48	+
13:8964346-8974840	148	deletion	2348	6.92	-
13:9004308-9026287	148	deletion	5200	10.89	-
13:9065009-9075157	148	deletion	2760	10.39	-
13:9110934-9132394	148	deletion	13589	12.74	-
13:9270236-9302586	148	deletion	4689	5.79	-
13:9352362-9381014	148	deletion	5070	6.09	-
13:9437370-9587226	148	deletion	22985	5.51	-
13:9614002-9650112	148	deletion	9192	7.03	-
13:9750230-9762383	148	deletion	3689	4.06	-
13:18807866-18910924	169	deletion	8229	5.72	+
13:22910138-22922399	1954	deletion	2169	4.87	+
13:22962163-22987634	1954	deletion	5178	5.89	+
13:23534131-23708214	6427	deletion	32866	4.02	+
13:23766123-23871039	6427	deletion	24382	4.63	+
13:29404614-29409659	5951	deletion	2965	8.86	+
13:29527318-29561886	5951	deletion	4949	12.53	+
13:29623682-29709535	5951	deletion	13814	6.36	+
13:30970148-31013055	2484	deletion	13431	5.15	+
13:34672838-34798325	450	deletion	16496	4.07	-
13:35013716-35131953	450	deletion	14505	4.55	-
13:35217151-35270520	450	deletion	20674	5.24	-
13:37463161-37489433	356	deletion	9551	4.55	-
13:37581859-37755321	356	deletion	13088	4.08	-
13:39502928-39524904	1656	deletion	5549	4.07	+
13:43210739-43219555	192	deletion	3480	4.09	-
13:44887217-44966468	5678	deletion	14754	14.44	-
13:45057962-45132796	5678	deletion	6407	5.19	-
13:45370990-45415645	6215	deletion	16476	8.58	-
13:46977916-46999148	708	deletion	7798	5.28	-
13:47110657-47117222	708	deletion	3944	7.38	-
13:47140055-47144173	708	deletion	2654	8.15	-
13:48444163-48588677	366	deletion	14990	4.28	-
13:48651694-48693022	366	deletion	938	4.09	-
13:48768555-48783301	366	deletion	3340	7.21	-
13:48814802-48855585	366	deletion	8171	6.97	-
13:48903324-48928192	366	deletion	12339	4.58	-
13:48958730-49042828	366	deletion	14782	4.39	-
13:49316552-49423685	338	deletion	21800	4.34	-
13:51617764-51641592	828	deletion	6268	4.96	-
13:51695955-51728037	828	deletion	9206	5.44	-
13:55273269-55283019	799	insertion	7358	8.41	-
13:59321574-59361163	1034	deletion	12508	7.12	-
13:59399890-59413709	1034	deletion	3061	9.89	-
13:59496717-59510215	1034	deletion	4014	4.79	-
13:59551425-59577718	1034	deletion	12692	4.01	-
13:60058923-60066082	1882	deletion	4187	5.09	-
13:61242833-61305207	1703	deletion	3833	4.02	-
13:63510957-63610157	48	deletion	83305	8.95	+
13:63643221-63717791	48	insertion	50291	5.72	+
13:63766076-63810844	48	deletion	14654	5.75	+
13:63899168-63900393	48	insertion	37311	5.71	+
13:64318332-64350785	48	deletion	5277	4.96	+
13:64460767-64572249	48	deletion	15272	8.46	+
13:64605040-64621939	48	deletion	4547	7.94	+
13:75093692-75215486	12	deletion	23099	8.52	-
13:75242960-75433711	12	deletion	39396	7.24	-
13:75501196-75526123	12	deletion	8384	8.78	-
13:75631355-75654277	12	insertion	5393	16.99	-
13:75680105-75716511	12	deletion	4692	12.66	-
13:75865632-75915261	12	deletion	10066	15.02	-
13:75974246-76029845	12	deletion	18273	14.10	-
13:76092128-76190390	12	deletion	16717	15.13	-
13:76220585-76290517	12	deletion	12250	12.55	-
13:76361579-76368962	12	deletion	2965	15.58	-
13:76427477-76445776	12	deletion	16005	16.06	-
13:76541011-76588915	12	deletion	19172	11.91	-
13:76630422-76641501	12	insertion	2292	5.96	-
13:77884576-77899894	484	deletion	4505	7.68	+
13:78010663-78032508	484	deletion	7177	6.16	+
13:79115399-79126673	1137	deletion	2191	5.04	-
13:81426595-81583913	325	deletion	36330	4.67	+
13:81927878-81933079	325	insertion	5103	8.20	+
13:81990258-82032616	325	deletion	20286	6.02	+
13:82222019-82236434	325	deletion	5277	7.25	+
13:82287079-82383187	325	deletion	17341	4.05	+
13:82612614-82867782	325	deletion	38086	5.64	+
13:90258745-90410438	2936	deletion	31459	8.25	-
13:99296788-99306274	4535	deletion	5493	5.30	-
13:99351772-99542292	4535	deletion	31996	4.80	-
13:99607622-99623156	4535	deletion	5748	7.25	-
13:99664054-99810525	4535	deletion	15234	6.07	-
13:102569597-102588290	2771	deletion	4690	6.64	-
13:102668130-102727659	2771	deletion	7949	5.98	-
13:102838410-102856728	2771	deletion	5528	6.05	-
13:106214275-106277192	2150	deletion	2619	4.19	-
13:106657731-106676631	2150	deletion	2769	4.14	-
13:112276346-112295987	367	deletion	3700	5.33	-
13:112330004-112364286	367	deletion	6727	5.90	-
13:112421165-112541623	367	deletion	27421	6.23	-
13:112747592-112756744	367	deletion	2062	6.83	-
13:112781938-112816080	367	deletion	19817	6.58	-
13:113164509-113187412	367	insertion	143284	5.14	-
13:113234400-113278993	367	deletion	9296	7.52	-
13:113383181-113398645	367	deletion	5114	6.01	-
13:113434741-113508603	367	deletion	8895	4.85	-
13:118537041-118562097	4933	deletion	6237	4.18	+
13:119739760-119752291	412	deletion	11401	4.45	-
13:123892347-124041967	19	deletion	19803	9.74	-
13:124070246-124190470	19	deletion	28737	6.93	-
13:124210819-124261464	19	deletion	8137	5.76	-
13:124303466-124350056	19	deletion	14657	5.74	-
13:124400437-124405721	19	deletion	2160	5.81	-
13:124469166-124481931	19	deletion	2883	9.37	-
13:124982779-124991689	1841	deletion	2021	5.58	+
13:130865756-130886511	1475	deletion	10774	5.80	+
13:130930597-131015504	1475	insertion	170340	6.07	+

Chromosome: 14

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
14:4499778-4543173	1466	deletion	12768	5.14	-
14:4579036-4608785	1466	deletion	6732	5.36	-
14:4977978-4993666	3201	insertion	7117	5.99	+
14:5027318-5038838	3201	deletion	2643	4.16	+
14:14708732-14716442	875	deletion	2489	8.81	+
14:14778990-14824973	875	deletion	14048	7.91	+
14:14842848-14974112	875	deletion	18991	5.07	+
14:15021250-15035219	875	deletion	4357	4.18	+
14:15246739-15440754	875	deletion	33275	7.08	+
14:15468810-15572118	875	deletion	17740	4.99	+
14:15590040-15613063	875	deletion	7518	4.16	+
14:17653591-17710154	7353	deletion	7365	5.11	+
14:17878977-17884200	7353	deletion	2018	5.04	+
14:18044703-18062707	79	deletion	2632	5.21	-
14:18091921-18098689	79	deletion	2314	5.81	-
14:18200272-18225318	79	deletion	2845	4.12	-
14:18253021-18272667	79	deletion	13237	15.60	-
14:18296054-18311526	79	deletion	2474	5.41	-
14:18393234-18529108	79	deletion	17711	15.60	-
14:18546097-18642768	79	deletion	17711	14.27	-
14:18660548-18854663	79	deletion	43792	10.38	-
14:18892064-18909124	79	deletion	2511	5.14	-
14:18936576-19060436	79	deletion	15624	11.01	-
14:19233853-19248043	79	deletion	7487	22.53	-
14:19321407-19358679	79	deletion	4494	15.98	-
14:19424675-19438223	79	deletion	2499	6.49	-
14:19458199-19468334	79	deletion	1869	4.02	-
14:19581703-19692536	79	deletion	15804	10.61	-
14:19774351-19865906	79	deletion	21392	9.02	-
14:20104348-20186982	1107	deletion	14343	4.19	-
14:20231647-20243021	1107	deletion	2180	4.01	-
14:22081440-22092660	50	deletion	2724	4.70	+
14:22118670-22124324	50	deletion	3899	4.54	+
14:22553113-22559338	50	deletion	2028	4.15	+
14:22581203-22599011	50	deletion	2679	4.25	+
14:23166465-23236218	968	deletion	2623	4.23	+
14:23247375-23252322	968	deletion	3162	5.99	+
14:23294192-23301916	968	deletion	2525	4.42	+
14:23566420-23571555	968	deletion	3574	5.29	+
14:23624284-23683094	968	deletion	6512	4.08	+
14:23718479-23730849	968	deletion	2613	4.83	+
14:26454867-26477603	3214	deletion	4219	13.82	-
14:26532352-26635013	3214	deletion	19343	17.95	-
14:26693071-26728685	3214	deletion	7450	17.29	-
14:26782062-26794979	3214	deletion	6027	16.59	-
14:26839997-26847539	3214	deletion	2625	13.72	-
14:26996364-27175335	3214	deletion	42166	4.30	-
14:27187745-27296867	3214	deletion	27201	8.11	-
14:27336152-27374311	3214	deletion	11129	7.57	-
14:27425585-27489686	3214	deletion	15797	8.87	-
14:27574223-27642255	3214	deletion	21483	6.53	-
14:28242902-28261674	315	deletion	4326	11.47	+
14:28289963-28306148	315	deletion	7446	11.15	+
14:28402721-28447805	315	deletion	14123	9.55	+
14:28499183-28622699	315	deletion	27189	10.04	+
14:28653730-28668862	315	deletion	5509	9.80	+
14:29196393-29205147	2550	deletion	5482	4.96	-
14:29470129-29481723	231	deletion	3020	7.40	+
14:29526289-29557837	231	deletion	11789	12.18	+
14:29643260-29732968	231	deletion	22370	13.75	+
14:29753847-29848949	231	deletion	20866	15.95	+
14:29868777-29920503	231	deletion	12039	13.78	+
14:29986240-30014066	231	insertion	6067	15.93	+
14:30079802-30115025	231	deletion	15400	13.97	+
14:30133874-30236724	231	deletion	26537	11.49	+
14:30453317-30608483	231	deletion	31796	4.15	+
14:46371320-46442622	1123	insertion	4307	7.95	+
14:46483398-46522378	1123	deletion	867	7.04	+
14:46583389-46592798	1123	insertion	3161	9.00	+
14:46645125-46651303	1123	insertion	7771	4.89	+
14:46854261-46860618	1123	insertion	6036	4.44	+
14:53608418-53625347	1125	deletion	4857	5.25	-
14:53707277-53799765	1125	deletion	19442	6.75	-
14:54855108-54880261	417	deletion	7008	5.51	+
14:60005425-60055926	368	deletion	9367	7.79	-
14:63070567-63091438	1023	deletion	6076	6.73	+
14:63143602-63164316	1023	deletion	8134	7.63	+
14:63191062-63299697	1023	deletion	20713	7.40	+
14:63366486-63386044	1023	deletion	5938	4.33	+
14:63985239-64006368	29	deletion	8210	6.00	+
14:64024134-64047065	29	deletion	6463	6.02	+
14:64211580-64263803	29	deletion	10756	15.00	+
14:64291858-64296927	29	deletion	3159	15.53	+
14:64321632-64457930	29	deletion	29265	16.31	+
14:64503009-64536781	29	deletion	22702	16.74	+
14:64548456-64550164	29	insertion	13618	15.92	+
14:64596975-64606818	29	deletion	4386	16.90	+
14:64690047-64811285	29	deletion	17593	10.17	+
14:64885748-65041671	29	deletion	31938	5.53	+
14:65085037-65203190	29	deletion	22700	8.77	+
14:65361958-65472957	29	deletion	34318	6.47	+
14:65525421-65628661	29	deletion	24150	8.58	+
14:65651780-65661157	29	deletion	7466	11.01	+
14:65696631-65709473	29	deletion	3769	7.71	+
14:67335428-67356457	1186	deletion	3628	4.59	-
14:67673532-67764427	1186	deletion	15420	4.10	-
14:67791772-67839617	1186	deletion	9013	5.23	-
14:68892177-68956337	321	deletion	24747	4.60	+
14:69000041-69013664	321	deletion	3672	6.63	+
14:76688598-76835383	446	deletion	24275	4.85	+
14:76874162-76975311	446	deletion	22056	4.54	+
14:77335975-77483741	446	deletion	9708	5.74	+
14:77526810-77597930	446	deletion	14106	6.03	+
14:78039007-78054285	308	deletion	4737	8.08	-
14:78099737-78180040	308	deletion	19236	6.89	-
14:78337363-78382865	308	deletion	9725	12.57	-
14:78433772-78450599	308	deletion	4033	14.20	-
14:78617203-78625406	308	deletion	4043	15.92	-
14:78673082-78827667	308	deletion	13458	13.88	-
14:78851671-78908505	308	deletion	10043	14.79	-
14:78997506-79059395	308	deletion	10577	14.22	-
14:79100011-79128484	308	deletion	13662	13.85	-
14:79192493-79223951	308	deletion	7008	11.42	-
14:79471030-79627585	308	deletion	24965	5.52	-
14:79657571-79762747	308	deletion	17706	5.27	-
14:89348014-89403281	1111	deletion	9820	6.15	-
14:105859223-105957989	752	deletion	16872	5.88	+
14:106021673-106034560	752	deletion	5607	4.45	+
14:124382772-124422896	212	deletion	9091	7.48	-
14:124465570-124476966	212	deletion	2946	7.35	-
14:124504709-124513848	212	insertion	6998	6.67	-
14:124641444-124812518	212	deletion	137388	15.63	-
14:124863072-124889645	212	insertion	96467	12.75	-
14:124966805-125014188	212	deletion	9387	13.56	-
14:125120785-125262478	212	deletion	22809	8.10	-
14:125302255-125310735	212	deletion	4962	8.98	-
14:125362889-125477800	212	deletion	28225	4.64	-
14:127995595-128005376	5528	insertion	167985	6.32	-
14:128028183-128260109	5528	deletion	217981	4.39	-
14:128313040-128332432	5528	deletion	3981	8.29	-
14:128367943-128461891	5528	deletion	20983	9.65	-
14:128480918-128631830	5528	deletion	40003	8.22	-
14:128679494-128785223	5528	deletion	23627	8.31	-
14:128879149-128918448	5528	deletion	13224	8.59	-
14:128948001-128955778	5528	deletion	1782	4.79	-
14:129007756-129081215	5528	deletion	17522	4.28	-

Chromosome: 15

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
15:5217751-5371660	104	deletion	20190	9.97	-
15:5383585-5483017	104	deletion	24164	6.01	-
15:5519708-5582213	104	deletion	18128	6.88	-
15:5697283-5728286	104	deletion	6420	6.79	-
15:25516276-25539230	4160	deletion	6133	5.57	+
15:25572943-25597251	4160	deletion	6468	5.35	+
15:25665639-25695969	4160	deletion	14584	9.03	+
15:26020866-26024483	4160	insertion	5825	4.36	+
15:26518474-26526185	633	insertion	5648	19.41	-
15:26644778-26701140	633	deletion	6516	16.72	-
15:26748353-26753159	633	insertion	4704	14.27	-
15:26831614-27039939	633	deletion	26598	13.70	-
15:27047825-27209254	633	deletion	22305	17.17	-
15:27229531-27235524	633	deletion	1846	6.20	-
15:27323746-27397815	633	deletion	13606	14.88	-
15:41311925-41374334	1374	deletion	15846	5.68	-
15:61537772-61553567	209	deletion	5658	6.61	-
15:62593432-62620725	5869	deletion	12731	5.60	-
15:62666170-62707024	5869	deletion	8163	5.03	-
15:62734926-62842356	5869	deletion	12216	5.92	-
15:62888607-62909319	5869	deletion	15243	6.74	-
15:62972168-62999452	5869	deletion	3490	6.30	-
15:63064498-63091969	5869	deletion	11271	6.94	-
15:63137180-63211161	5869	deletion	10799	4.35	-
15:66150865-66151353	790	insertion	6025	9.19	+
15:66292749-66321220	790	deletion	4829	14.04	+
15:70457515-70481719	1557	deletion	4449	5.43	-
15:70532601-70601658	1557	deletion	11639	11.81	-
15:70693185-70739405	1557	deletion	5350	15.03	-
15:70848519-70876876	1557	deletion	4277	13.96	-
15:70917145-71148459	1557	deletion	38731	11.79	-
15:71354230-71377357	1557	deletion	6323	25.97	-
15:71544363-71562508	1557	deletion	4429	7.29	-
15:71573784-71610970	1557	deletion	5113	8.07	-
15:71656904-71742856	1557	deletion	16191	6.25	-
15:71765851-71773132	1557	deletion	2078	7.48	-
15:71803815-71999629	1557	deletion	35065	10.16	-
15:72021972-72156629	1557	deletion	27654	12.29	-
15:77549201-77555134	845	deletion	2774	4.71	-
15:77820149-77839332	7301	deletion	13288	4.50	+
15:78318335-78326186	330	deletion	2152	6.13	+
15:78392002-78500872	330	deletion	22699	5.34	+
15:78773834-78784091	330	deletion	2628	9.97	+
15:78833809-78942449	330	deletion	3550	8.17	+
15:79019349-79033800	330	deletion	9223	17.70	+
15:79081227-79089033	330	deletion	6119	16.79	+
15:79128320-79198004	330	deletion	12894	18.01	+
15:79263500-79296747	330	deletion	10921	15.11	+
15:79391922-79401861	330	deletion	4441	12.00	+
15:79512834-79577607	330	deletion	7971	5.90	+
15:81255351-81270684	1271	deletion	11213	12.62	-
15:81422320-81437402	1271	deletion	7004	5.93	-
15:81503004-81514315	1271	insertion	9251	4.30	-
15:82230346-82240788	675	deletion	2522	4.03	+
15:82678783-82686704	506	deletion	2778	7.05	+
15:83971483-83982366	1356	deletion	2377	5.31	+
15:84318767-84427917	3493	deletion	23232	10.36	+
15:84558732-84576660	3493	deletion	4076	10.26	+
15:84601489-84620428	3493	deletion	4479	9.91	+
15:84658712-84761304	3493	insertion	37557	9.68	+
15:84778091-84873417	3493	deletion	86461	12.31	+
15:84929728-84971563	3493	deletion	14228	11.67	+
15:85004233-85021096	3493	deletion	6218	12.13	+
15:85116182-85121927	3493	deletion	3527	4.52	+
15:86662400-86837222	182	deletion	26010	7.94	-
15:86871322-86972374	182	deletion	19572	4.49	-
15:87142953-87216087	182	deletion	16044	14.45	-
15:87235958-87339063	182	deletion	72405	14.66	-
15:87371994-87416933	182	insertion	40205	13.10	-
15:87447428-87455423	182	deletion	2351	9.68	-
15:87492367-87517501	182	deletion	3091	6.12	-
15:87595291-87611651	182	deletion	5529	9.10	-
15:94766286-94782166	969	deletion	3302	5.77	-
15:94958307-95111188	969	deletion	22475	4.46	-
15:98463149-98613914	149	deletion	31724	4.24	-
15:99045443-99188662	149	deletion	26470	4.15	-
15:100853268-100903015	126	deletion	7951	5.60	+
15:100926286-101001053	126	deletion	11063	4.31	+
15:101066838-101086906	126	deletion	3349	6.58	+
15:101130843-101149650	126	deletion	6792	8.20	+
15:101203516-101213335	126	insertion	1999	5.83	+
15:106709269-106785708	184	deletion	23844	4.16	+
15:106827683-106838470	184	deletion	6409	4.35	+

Chromosome: 16

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
16:1297533-1381117	7220	deletion	17097	5.58	+
16:1393874-1397201	7220	insertion	2558	6.16	+
16:1447875-1530291	7220	deletion	22898	5.57	+
16:3810527-3835322	1825	deletion	6881	8.26	+
16:3906466-3965748	1825	deletion	7790	9.96	+
16:6721922-6726380	278	deletion	2298	5.85	+
16:6793026-6841176	278	deletion	11902	7.57	+
16:6889792-6914597	278	deletion	4061	10.39	+
16:7051914-7107473	278	deletion	14770	6.37	+
16:7887040-7900434	591	deletion	3435	5.93	+
16:7952172-8094025	591	deletion	40063	5.16	+
16:8160973-8202219	591	deletion	13943	6.74	+
16:8224361-8231299	591	deletion	3712	6.71	+
16:8257375-8290626	591	deletion	4390	7.41	+
16:8316726-8416066	591	deletion	15713	7.91	+
16:8473185-8478833	591	deletion	1978	8.00	+
16:8555316-8644216	591	deletion	14052	11.65	+
16:8683083-8734793	591	insertion	50756	12.74	+
16:8738514-8860620	591	deletion	99497	10.36	+
16:8977405-9166403	591	deletion	29906	11.50	+
16:9252000-9260557	591	deletion	6626	11.03	+
16:9347276-9358841	591	deletion	4666	13.38	+
16:9425856-9446595	591	deletion	4878	14.50	+
16:9513515-9521007	591	deletion	1991	6.24	+
16:9584196-9729537	591	deletion	23379	8.12	+
16:9790884-9866523	591	deletion	31987	6.42	+
16:9973071-10148223	591	deletion	7073	7.08	+
16:10191137-10341892	591	deletion	40340	6.85	+
16:10373129-10379985	591	deletion	2561	8.74	+
16:15773187-15866165	718	deletion	19573	8.18	-
16:15901264-15909626	718	deletion	3447	10.65	-
16:15946365-15972278	718	deletion	10188	9.74	-
16:16043248-16164754	718	deletion	28700	10.50	-
16:16226434-16313569	718	deletion	16518	9.24	-
16:16333946-16442839	718	deletion	32334	6.20	-
16:16486462-16571265	718	deletion	30543	4.81	-
16:16620124-16659804	718	deletion	13144	4.06	-
16:23651403-23714653	6472	deletion	14166	4.63	-
16:30059591-30106671	70	deletion	13420	7.26	+
16:30131757-30151271	70	deletion	12066	6.28	+
16:30172965-30232281	70	deletion	12936	5.34	+
16:30252882-30304743	70	deletion	13716	5.49	+
16:30360158-30372668	70	deletion	3393	9.80	+
16:30729328-30853176	70	deletion	26199	4.40	+
16:30898778-30927116	70	deletion	3650	4.40	+
16:38422775-38444305	1660	deletion	4985	4.30	+
16:38759419-38768201	1660	deletion	2774	4.30	+
16:39573181-39626574	1093	deletion	18178	4.21	+
16:46316274-46331726	5834	deletion	10854	5.80	-
16:46650091-46710957	5834	deletion	16545	4.78	-
16:51989070-52042633	726	deletion	8003	10.07	-
16:52144920-52328169	726	deletion	39070	7.30	-
16:52357592-52375744	726	deletion	3614	8.74	-
16:52401679-52455936	726	deletion	11098	8.92	-
16:52490157-52501625	726	deletion	2046	4.49	-
16:52538685-52564830	726	deletion	5550	7.13	-
16:100066064-100189377	1035	deletion	120583	5.04	+
16:100298725-100330284	1035	deletion	8384	5.83	+
16:100377430-100470260	1035	deletion	24075	5.69	+
16:100708423-100715272	1035	deletion	2415	10.47	+
16:100762072-100848687	1035	deletion	13541	7.06	+
16:103284957-103399337	420	deletion	22310	8.90	-
16:103487401-103517787	420	deletion	4410	4.87	-
16:104851817-104861017	42	deletion	3869	4.55	-
16:105177634-105256250	42	deletion	9839	4.37	-
16:105279605-105354810	42	deletion	14699	4.40	-

Chromosome: 17

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
17:10578475-10596536	5982	deletion	2522	4.47	+
17:13265283-13281219	1076	deletion	7666	16.33	+
17:13324124-13338084	1076	deletion	3080	10.28	+
17:13434815-13469929	1076	deletion	4399	12.41	+
17:13504843-13544165	1076	deletion	11575	12.06	+
17:13681433-13692619	1076	deletion	7553	5.58	+
17:13703404-13921613	1076	deletion	28728	6.37	+
17:13950965-13960897	1076	deletion	3087	8.42	+
17:13991193-14026834	1076	deletion	10891	7.21	+
17:29406799-29466734	719	deletion	8349	6.34	-
17:29562424-29615577	719	deletion	20962	4.25	-
17:33211631-33289056	1016	deletion	25698	8.72	-
17:33342320-33362100	1016	deletion	10198	10.27	-
17:34089334-34095670	72	deletion	3369	4.51	+
17:34152285-34216398	72	deletion	17929	4.15	+
17:37626907-37637713	1031	deletion	5540	7.64	+
17:37653869-37786140	1031	deletion	27792	4.22	+
17:37912233-37951248	1031	deletion	24281	4.42	+
17:37973259-37991056	1031	insertion	2155	5.35	+
17:48730886-48769890	995	deletion	770	4.95	+
17:48799673-48856963	995	deletion	20488	4.33	+
17:49058399-49222386	995	deletion	21422	5.28	+
17:49269617-49282743	995	deletion	2817	5.52	+
17:49306494-49480544	995	deletion	35841	5.51	+
17:51030088-51056297	1900	deletion	15431	5.09	+
17:53287435-53507210	10	deletion	72186	13.16	+
17:53551025-53640213	10	deletion	20505	10.28	+
17:53654697-53717873	10	deletion	12549	8.14	+
17:53757739-53827201	10	deletion	19268	12.24	+
17:53874138-53917009	10	deletion	11054	12.41	+
17:53996546-54077542	10	deletion	20409	10.22	+
17:54373133-54435971	10	deletion	11461	4.32	+
17:57457405-57472988	704	deletion	2215	4.98	+
17:57722940-57801646	704	insertion	94448	6.64	+
17:57864191-57875099	704	deletion	6533	4.63	+
17:70652119-70667489	886	deletion	6077	5.39	-
17:70703733-70772695	886	deletion	6447	4.80	-
17:88127981-88137188	2390	insertion	3465	4.85	+
17:88703113-88733106	949	deletion	8246	4.07	+
17:90699985-90777363	87	deletion	11127	5.89	-
17:90800354-90921481	87	deletion	15432	6.37	-
17:90976413-90994821	87	deletion	7732	6.84	-
17:93712424-93718247	147	deletion	3192	4.15	-
17:93941516-93963779	147	deletion	5694	4.54	-
17:99267313-99294304	666	deletion	3382	6.23	+
17:99329679-99506904	666	deletion	25601	5.24	+
17:99559812-99591615	666	deletion	6995	4.99	+

Chromosome: 18

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
18:2193002-2202003	2714	deletion	2824	4.55	+
18:2220558-2282955	2714	deletion	12717	4.82	+
18:2529178-2546247	256	deletion	2728	6.09	+
18:2581086-2591945	256	insertion	3436	5.90	+
18:2632480-2688136	256	deletion	12643	6.51	+
18:2735352-2766127	256	deletion	9410	8.80	+
18:2786630-2796713	256	deletion	7892	7.86	+
18:2890349-2900492	256	insertion	22385	7.70	+
18:2938254-2940802	256	insertion	15978	7.48	+
18:9602650-9615874	509	deletion	6868	5.10	-
18:9712466-9721683	509	deletion	3695	6.28	-
18:9764748-9769206	509	deletion	3240	6.31	-
18:9807131-9879058	509	deletion	12035	5.03	-
18:9919398-9935540	509	deletion	5378	5.56	-
18:23101555-23109687	373	deletion	2617	5.69	-
18:23375376-23501822	373	deletion	29117	6.04	-
18:23511641-23603260	373	deletion	19604	5.34	-
18:23701512-23739618	373	deletion	8470	5.38	-
18:23861482-23902432	373	deletion	1060	7.23	-
18:23949938-23957088	373	deletion	2159	5.02	-
18:24763502-24888099	373	deletion	11625	6.00	-
18:24972279-25039675	373	deletion	11960	6.05	-
18:25089150-25097281	373	deletion	4205	8.42	-
18:25157355-25169464	373	deletion	4141	7.92	-
18:25214685-25360891	373	deletion	25567	6.31	-
18:25402262-25551998	373	deletion	27097	5.88	-
18:25629075-25773141	373	deletion	18763	4.55	-
18:34003074-34074597	5990	deletion	20670	5.38	+
18:38191076-38205777	2034	deletion	5093	7.26	-
18:40243851-40260194	352	deletion	4308	7.53	+
18:44377511-44378287	426	insertion	12983	15.10	+
18:44476063-44482974	426	insertion	2687	8.10	+
18:44674464-44753650	1803	deletion	3175	4.66	-
18:44794560-44801871	1803	deletion	4463	4.71	-
18:47789854-47857036	4295	deletion	10159	5.51	-
18:49415006-49566150	896	deletion	32830	4.02	-
18:49954876-49983077	896	deletion	5663	5.50	-
18:64047677-64092237	1098	deletion	17786	6.06	+
18:64183598-64193645	1098	deletion	4525	10.33	+
18:64298699-64415074	1098	deletion	10213	6.08	+
18:65839925-65848553	6965	deletion	3093	4.75	-
18:66042852-66118466	6965	deletion	31330	5.07	-
18:68555443-68581084	468	deletion	12157	4.61	+
18:69255243-69263860	468	deletion	4903	4.90	+
18:72248230-72358401	33	deletion	21907	4.85	+
18:72600572-72621614	33	deletion	2971	7.07	+
18:72711228-72738416	33	deletion	11777	7.30	+
18:80963233-80989852	2161	deletion	3994	5.44	+
18:81048451-81063242	2161	deletion	3646	4.28	+
18:81351642-81372213	371	deletion	2631	4.62	+
18:81419682-81491029	371	deletion	18127	4.24	+
18:81583737-81725347	371	deletion	40204	5.36	+
18:81764592-81784862	371	deletion	3020	5.66	+
18:81801873-81811804	371	deletion	4797	5.67	+
18:86171296-86183599	480	deletion	6728	7.42	-
18:86208316-86313399	480	deletion	23611	5.75	-
18:86339409-86349537	480	deletion	2385	6.29	-
18:86397342-86451535	480	deletion	11744	6.42	-
18:86561452-86577643	480	insertion	8086	5.24	-
18:86606947-86616305	480	deletion	2737	5.07	-
18:86708357-86758016	1492	deletion	4958	5.65	+
18:87781821-87904578	710	deletion	26341	7.59	+
18:87928484-88096174	710	deletion	23241	10.99	+
18:88131377-88180879	710	deletion	8665	9.97	+
18:88215958-88285213	710	deletion	10490	11.22	+
18:88329637-88460659	710	deletion	46196	10.58	+
18:88503142-88655480	710	deletion	40201	9.03	+
18:88708998-88737391	710	deletion	16528	9.72	+
18:88817898-88847695	710	deletion	15522	9.35	+
18:88875472-88891490	710	deletion	6385	10.50	+
18:88920030-89035167	710	deletion	28924	12.94	+
18:89101987-89110311	710	deletion	3997	13.09	+
18:89133177-89154207	710	deletion	5057	13.34	+
18:89166342-89308638	710	deletion	21305	14.90	+
18:89364084-89377161	710	deletion	2613	8.38	+
18:89496906-89528414	710	insertion	5640	6.44	+
18:89609866-89676859	710	insertion	2138	6.02	+
18:89844527-89876505	6230	deletion	10298	7.27	-
18:89904984-90092404	6230	deletion	27606	5.84	-
18:90135445-90146338	6230	deletion	1956	4.32	-
18:90272109-90292586	6230	deletion	4062	7.89	-

Chromosome: 19

Region	Contig Map Name	Type	Indel size	Confidence score	Orientation
19:4785108-4790769	439	deletion	2153	5.30	+
19:4825112-4840250	439	deletion	8031	5.92	+
19:6214992-6312861	1358	deletion	26527	4.03	-
19:8005951-8018853	1370	deletion	2809	6.40	-
19:8053075-8091048	1370	deletion	9587	7.75	-
19:8185536-8339935	1370	deletion	24324	5.53	-
19:14288749-14298528	1191	deletion	3585	5.30	+
19:24396321-24409591	507	insertion	4182	22.38	+
19:24581312-24583174	507	insertion	3625	12.82	+
19:24701948-24713248	507	deletion	2290	6.26	+
19:28833584-28844880	638	deletion	2459	6.61	-
19:28946848-28957923	638	deletion	4716	12.60	-
19:29018614-29052645	638	deletion	17306	10.93	-
19:29158135-29306691	638	deletion	25005	13.47	-
19:29340535-29459044	638	deletion	19076	11.54	-
19:29541377-29664334	638	deletion	19293	12.28	-
19:29750643-29828521	638	deletion	16025	8.15	-
19:29875147-29949169	638	deletion	13914	9.06	-
19:30024002-30046610	638	deletion	4443	6.12	-
19:30120920-30151591	638	deletion	13392	6.30	-
19:30332694-30432154	638	deletion	84450	4.12	-
19:30474380-30659906	638	insertion	12488	6.31	-
19:30682617-30701989	638	deletion	3001	6.70	-
19:38803773-38868394	3507	deletion	11702	4.22	+
19:38888153-38914817	3507	deletion	4117	4.69	+
19:38926537-39037151	3507	deletion	15674	5.29	+
19:39068071-39089549	3507	deletion	7457	6.25	+
19:39379856-39389400	3507	deletion	4034	4.88	+
19:39430489-39462699	3507	deletion	13013	5.99	+
19:39551617-39553097	3507	insertion	2859	6.75	+
19:39599593-39733498	3507	deletion	33160	5.53	+
19:44733717-44750948	194	deletion	14697	12.29	-
19:44866138-44895673	194	deletion	7633	13.83	-
19:50760469-50795811	1002	deletion	10196	4.27	+
19:51115577-51123900	1002	deletion	3010	5.29	+
19:55943116-55958372	1059	deletion	6692	4.21	-
19:62726513-62735997	4466	deletion	7434	4.83	+
19:65015471-65047427	158	deletion	7117	4.92	+
19:65118337-65165790	158	deletion	14264	4.55	+
19:65194013-65201109	158	deletion	2799	7.09	+
19:65253750-65264885	158	deletion	3644	4.15	+
19:65419966-65584134	158	deletion	15667	6.04	+

Favourite species

All species

Recent locations

Please contact us for additional Punchlists.

Overview

Punchlist for: Bionano indels (CBA_J-R20150818)

Chromosome: X

Chromosome: 1

Chromosome: 2

Chromosome: 3

Chromosome: 4

Chromosome: 5

Chromosome: 6

Chromosome: 7

Chromosome: 8

Chromosome: 9

Chromosome: 10

Chromosome: 11

Chromosome: 12

Chromosome: 13

Chromosome: 14

Chromosome: 15

Chromosome: 16

Chromosome: 17

Chromosome: 18

Chromosome: 19

Punchlist(s)